DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zld and CG4820

DIOPT Version :9

Sequence 1:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster


Alignment Length:357 Identity:73/357 - (20%)
Similarity:116/357 - (32%) Gaps:99/357 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1146 NQITTSDGQILQLMPTSLFAPYAPLSPYSVAAQRSPQEGDLPPVHTLTTALHAHQQGGQQEAQTP 1210
            |.|.| |.|:|...........|.:..|....:|....|:.|.         |.:|...|:|..|
  Fly    48 NHICT-DCQVLLSQVQKFRRRCAKIEKYFARRRRRMNLGEAPA---------AMEQLRVQQAAAP 102

  Fly  1211 TLTVLSTPYSPTVSSSRATPALEMDMATLMQHHQDYEMEQYQMQHQQLDQMQQHQQQL------- 1268
                               ..|.:|.   :....|.::|..|:|.::..|....:.||       
  Fly   103 -------------------DPLGIDE---LMSASDIKIEPIQLQMEEDPQAPYPENQLEQALSYG 145

  Fly  1269 ------------DHQQQQQILADQTQTMAQQPLAKKRRGGNATPSTTKRRRNSSVGSTSPHSTTL 1321
                        |:.:.|..:|..|...||      ||..| |.....::....||....|...:
  Fly   146 NAPGEDILPLPEDYGEAQTEVATTTNEPAQ------RRSKN-TAKIKSKKHTMRVGRKLIHVKVI 203

  Fly  1322 PSGRIK--------------CLECDKEFTKNCYLTQHNKSFHSGEYPFRCQKCGKRFQSEDVYTT 1372
            ...:.|              |..|.::|.....|..|... |:|..||.|.:|.::     .||.
  Fly   204 DDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLR-HTGTKPFECDQCHQK-----CYTL 262

  Fly  1373 H-LGRHRTQ--DKPHKCELCPKQFHHKTDLRRHV--------------EAIHTGLKQHMCDICEK 1420
            | |.||:.:  :.|:.|..|..::...:...||.              |.|..|.:...|::|:.
  Fly   263 HLLRRHQLKHTEGPYACTFCGLEYSTNSSRVRHEREACKKGRAPQSKWEIIKKGERTFHCEVCDL 327

  Fly  1421 GFCRKDHLRKHLET----HNRPRVVGKKSAAA 1448
            .|.|..:..:|:.:    .|..|...|.:..|
  Fly   328 WFLRAGNFTQHINSSSHIENERRKKRKSNPTA 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 19/63 (30%)
C2H2 Zn finger 1328..1349 CDD:275368 5/20 (25%)
C2H2 Zn finger 1357..1377 CDD:275368 6/20 (30%)
C2H2 Zn finger 1386..1407 CDD:275368 5/34 (15%)
zf-H2C2_2 1398..1422 CDD:290200 7/37 (19%)
zf-C2H2 1413..1435 CDD:278523 5/25 (20%)
C2H2 Zn finger 1415..1435 CDD:275368 5/23 (22%)
CG4820NP_001097748.1 zf-AD 4..75 CDD:285071 7/27 (26%)
C2H2 Zn finger 224..244 CDD:275368 5/20 (25%)
C2H2 Zn finger 252..272 CDD:275368 8/24 (33%)
C2H2 Zn finger 279..297 CDD:275368 4/17 (24%)
C2H2 Zn finger 322..339 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457218
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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