DRSC/TRiP Functional Genomics Resources

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Protein Alignment zld and ham

DIOPT Version :9

Sequence 1:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster


Alignment Length:1316 Identity:222/1316 - (16%)
Similarity:365/1316 - (27%) Gaps:550/1316 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 ANVHGESPYG---SSGYASSPYIKEEMPTP-QPPGVGSATANPGELLDLDSQKMVYH-QQLLQQQ 359
            |...|.:|..   ...:|:..::.::.|.. .||        ..:.||:..|::::| ....||.
  Fly    36 ARSQGFNPLSEQIEDSFAARHHLPQQEPVEGSPP--------RRDHLDIQDQELLHHPNHFHQQN 92

  Fly   360 QQQHDVVAGLPLGALP-----------DPLHSMQSMQQRALHSWEQQPQQTVASVEGLPPYMQQG 413
            |:|......|||....           |.....::..:..|..|.:: ::.|..::     ::..
  Fly    93 QRQQPPPPTLPLSVESSSAAAASVDGMDAFFKDRAQAEHILQEWVRR-REPVCELD-----IRDS 151

  Fly   414 LGVGLGVGVDKSPYYSP----------------KQSPYH---------------------QSTGV 441
            .||.....:.:...|.|                |....|                     |...:
  Fly   152 GGVYAKTPLQRGTRYGPFPMKLSHQPNDPQLAWKAHSRHYNGWLEPTEDVSTWLKKIRSVQDDCI 216

  Fly   442 GGATLIKQEYGGHGLIKSEYPDSQHYVDKSFDPTAGG------------AGGAELCASVATSPAE 494
            |.|.|  |.|...|.:   :.::..||:...:....|            ..|.::.|:.|.:.|.
  Fly   217 GEANL--QSYINAGYL---WYETNRYVNAGSEMVVDGRPKSPVQLNEDFMNGGKVLAAAAAAAAA 276

  Fly   495 FPSTTTGGPGQEGAAGAAP---------GGGYRGFE---PPSSSSVLPANSL------------- 534
            ..:.::.|....|...:||         |..|.|.|   ...:||::....:             
  Fly   277 VVAASSSGAKSGGGGSSAPSDDRSDRDNGSLYSGDEFSKDKKNSSLIREGDIDFTDDENGFDIRC 341

  Fly   535 ----------------TAKAATWKSNE----------ARRP-------------KTYNCTACNKW 560
                            ...|..:|.:|          ..||             :.|:|..|:|.
  Fly   342 EVCDKVYPDLDLLDDHLIGAHHFKQDEFPCKQCALRFCHRPLLIKHEAISHNNIRKYSCENCSKV 406

  Fly   561 FTSSGHLKRHYNTTLHKNAVKSSGQPDPATLPISAHHHPARDPVTKPSRRGNAAAAAAAAAAAAS 625
            |....:|:||                      |.|:|..||..                      
  Fly   407 FCDPSNLQRH----------------------IRAYHVGARCH---------------------- 427

  Fly   626 ASGQGQQQQPPIPPPPANVPPPEPPRSPPDYGGGGGLGVGAMGGAAMSQY---SASP------SP 681
                               |.||           .|...|...|....|:   |..|      |.
  Fly   428 -------------------PCPE-----------CGKTFGTSSGLKQHQHIHSSVKPFACEVCSK 462

  Fly   682 TQQQQHHLNHHQQQANGYANGTANGYGYMQQQVQ--------STTNASPQHAS--NNNSNNQQQQ 736
            ...|..:|..|::.           :...:.|::        ||..:..:|..  ::......:.
  Fly   463 AYTQFSNLCRHKRM-----------HATCRMQIKCDKCNQSFSTLTSLTKHKKFCDSTGPGPYRN 516

  Fly   737 QQQQQHHQQQMPQHHNSVLNGHPNGLAGPSAPHNNNTTQMPSSQMRGLLNETTTTPPPTTTTRAP 801
            |...:|||             ||:....|..||...|.             |:|.|.|      |
  Fly   517 QHVNRHHQ-------------HPHQHPLPHQPHLAATA-------------TSTCPAP------P 549

  Fly   802 QITTTATTTTTAATTVAIKS-----------------------EQMEDSNHTHTHTH-------- 835
            :.::.::::..||...|:.:                       ......|..|. |:        
  Fly   550 RESSESSSSAAAAAVAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPFLPQNPLHP-TNIPMFFSKN 613

  Fly   836 -----------THPNHSHSQDRSH---SSSSSSSMATEEAEEQEL---RDQEQADDHLHQHQQAS 883
                       |.|..:..|....   ...:|.|.|.::..|:||   .:::...:.|.|..:..
  Fly   614 PMDLGCGGPEITSPVSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEPLVQAFEGE 678

  Fly   884 QQYLLSARHYHSSTPNTLSSSNTNPSTPSSNSPHTIYRQEQQGTDFSR------TTPPPQPLPPM 942
            :....|:........:|.:.|.:.........|..:...:||..:..|      :||||...|..
  Fly   679 EDESRSSLDIKGKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSG 743

  Fly   943 GMLPPMAMDYNMLALDMPMPMPTLMHSNMLQCSSTSTTPLATTITTSMPDTMQPPQQQLVHHYQA 1007
            |..|          ||:.:            |...|.   .:..|....|.:      ::|.:..
  Fly   744 GDGP----------LDLSI------------CRKRSA---GSFFTAPAEDNL------MLHRFMP 777

  Fly  1008 VLHPLHQQLGEQHQRQEADHHQQQRELHQLDQQQQQQQALILADSLPHSSSSPTSSSPPPTMPMP 1072
            .||....:.|:.         .:.|:.|...:....|::        |..||||   |.||    
  Fly   778 RLHEFEAERGQP---------LKMRKSHSSAESSTSQKS--------HKGSSPT---PTPT---- 818

  Fly  1073 LTTITAPQLLPLQPPPPHITSTMPMPPTMHMPIMPPPPQCYQQLQPLDPTMSYHTIIGSGPEAHT 1137
                .:|.|.|           .|.|||                                     
  Fly   819 ----ASPGLTP-----------SPSPPT------------------------------------- 831

  Fly  1138 GTAGGGYSNQITTSDGQILQLMPTSLFAPYAPLSPYSVAAQRSPQEGDLPPVHTLTTALHAHQQG 1202
             :|||..|   :||:|..:..|..:.||                             |.|:....
  Fly   832 -SAGGELS---STSEGGAVPTMAAAAFA-----------------------------ADHSALAS 863

  Fly  1203 GQQEAQTPTLTVLSTPYSPTVSSSRATPALEMDMATLMQHHQDYEMEQYQMQHQQLDQMQQHQQQ 1267
            |      |||......:.|.:        ||               |.|:.....|.|       
  Fly   864 G------PTLPQTHPTFHPLL--------LE---------------EIYRSGFPFLCQ------- 892

  Fly  1268 LDHQQQQQILADQTQTMAQQPLAKKRRG------GNATPSTTKRRR---NSSVGSTSPHSTTLPS 1323
                                  ...|||      |.|:.:..||..   ..|.||.....|   .
  Fly   893 ----------------------PGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVVGLKT---K 932

  Fly  1324 GRIKCLECDKEFTKNCYLTQHNKSFHSGEYPFRCQKCGKRFQSEDVYTTHLGRHRTQDKPHKCEL 1388
            .|..|..|.|.|.::..||:|.:: |:||.|:.|:.|.:.|........|:.....:::|.:|||
  Fly   933 DRYSCKFCGKVFPRSANLTRHLRT-HTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKERPFRCEL 996

  Fly  1389 CPKQFHHKTDLRRHVE 1404
            |.:.|..:|:|.|||:
  Fly   997 CDRSFGQQTNLDRHVK 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983 8/24 (33%)
LIM 1328..1389 CDD:259829 18/60 (30%)
C2H2 Zn finger 1328..1349 CDD:275368 7/20 (35%)
C2H2 Zn finger 1357..1377 CDD:275368 4/19 (21%)
C2H2 Zn finger 1386..1407 CDD:275368 10/19 (53%)
zf-H2C2_2 1398..1422 CDD:290200 4/7 (57%)
zf-C2H2 1413..1435 CDD:278523
C2H2 Zn finger 1415..1435 CDD:275368
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978 19/132 (14%)
C2H2 Zn finger 341..363 CDD:275368 1/21 (5%)
C2H2 Zn finger 371..392 CDD:275368 2/20 (10%)
SFP1 <391..479 CDD:227516 26/172 (15%)
C2H2 Zn finger 400..421 CDD:275368 9/42 (21%)
SUF4-like 403..>445 CDD:411020 17/115 (15%)
C2H2 Zn finger 403..421 CDD:411020 8/39 (21%)
C2H2 Zn finger 429..449 CDD:275368 6/30 (20%)
C2H2 Zn finger 457..477 CDD:275368 4/30 (13%)
C2H2 Zn finger 486..504 CDD:275368 3/17 (18%)
PTZ00121 <641..>728 CDD:173412 15/86 (17%)
COG5048 935..>1028 CDD:227381 26/79 (33%)
zf-C2H2 935..957 CDD:395048 7/22 (32%)
C2H2 Zn finger 937..957 CDD:275368 7/20 (35%)
zf-H2C2_2 949..973 CDD:404364 9/24 (38%)
C2H2 Zn finger 965..986 CDD:275368 4/20 (20%)
C2H2 Zn finger 994..1014 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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