DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zld and CG10348

DIOPT Version :9

Sequence 1:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster


Alignment Length:688 Identity:136/688 - (19%)
Similarity:237/688 - (34%) Gaps:235/688 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   914 NSPHTIYRQEQQGTDFSRTTPPPQPLPPMGMLPPMAMDYNMLALDMPMPMPTLMHSNMLQCSSTS 978
            :||..:....:||..:          |.:|::|...:.:        :|......:::...||:|
  Fly     6 HSPRKMLPSPKQGCVY----------PALGLIPTSYISH--------VPYDLASSASVAATSSSS 52

  Fly   979 TTPLATTITTSMPDTMQPPQQQLVHHYQAVLHPLHQQLGEQHQRQEADHHQQQRELHQLDQ---- 1039
            |:|..|:.||:         .:|.|.:.      ||      |.|..:||.:.:.....||    
  Fly    53 TSPTTTSATTT---------GRLQHQHS------HQ------QHQTLNHHAKGKRRSSFDQPLDL 96

  Fly  1040 QQQQQQALILADSLPHSSSSPTSSSPPPTMPMPLTTITAPQLLPLQPPPPHITSTM-----PMPP 1099
            :...::...|.|..|....:       ..:.|..:.:...|....:....||.:::     .|..
  Fly    97 RLAHKRKTDLVDQGPMEDEN-------SNLIMFASELAVAQQKEKELNNNHIAASLADLGFDMSR 154

  Fly  1100 TM-----------------------HMPIMPP--PPQCYQQLQPLDPTMSYHTIIGSGPEAHTGT 1139
            .|                       ..|..||  ||||  .:..:.||:.         ||.|  
  Fly   155 KMLRALREGGAGGGGGGGGGGGGGGGPPNAPPLTPPQC--SIPAVHPTLL---------EAMT-- 206

  Fly  1140 AGGGYSNQITTSDGQILQLMPTSLFAPYAPLSPYSVAAQRSPQEGDLPPVHTLTTALHAHQQGGQ 1204
                          :.|.|...::||...|....|.||..||...|.|..|.|...         
  Fly   207 --------------KNLPLQYRNVFAGVLPGKVNSPAASSSPTGADFPFRHPLKKC--------- 248

  Fly  1205 QEAQTPTLTVLSTPYSPTVSSSRATPALEMDMATLMQHHQDYEMEQYQMQ----HQQLDQMQQHQ 1265
                     .|:.| .||                          ||.|::    :.:|..:..|.
  Fly   249 ---------ELTWP-PPT--------------------------EQLQLELPHPNPKLSPVLPHP 277

  Fly  1266 QQLDHQQQQQILADQTQTMAQQPLAKKRRGGNATPSTTKRRRNSSVGSTSPHSTTLPSGRIKCLE 1330
            |..|:|.:::   ::.:|.|        .||||||:..:|.::                |..|..
  Fly   278 QLQDYQTRRK---NKARTAA--------TGGNATPNLPQRNKD----------------RYTCKF 315

  Fly  1331 CDKEFTKNCYLTQHNKSFHSGEYPFRCQKCGKRFQSEDVYTTHLGRHRTQDKPHKCELCPKQFHH 1395
            |.|.|.::..||:|.:: |:||.|::|:.|.:.|........|:.....:::|.|||:|.:.|..
  Fly   316 CGKVFPRSANLTRHLRT-HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQ 379

  Fly  1396 KTDLRRHVEAIHTGLKQHMCDI--------------CEKGFCRK-------DHLRKHL------- 1432
            :|:|.||       ||:|..|.              |.:.||..       :.:|..:       
  Fly   380 QTNLDRH-------LKKHESDAVSLSALSGVSERMHCIRRFCENPTEESYFEEIRSFMGKVTQQQ 437

  Fly  1433 ------ETHNRPRVVGKKSAAAAAAAAAAAAVTATAG---LGGAPAAGSI-KAAFARSLTVTAVS 1487
                  :.|::.:...:.:|.:|:::.:::..|.|:.   ...|||..:. .||.:.|.......
  Fly   438 QQQQQQQQHDQQQQQHQSTATSASSSCSSSRDTPTSSHEEADHAPATSTADTAAPSSSRDQEEED 502

  Fly  1488 SEPGAGVAIPSAPATATCAPVSVSASALVQAVNPSLTS 1525
            |:|   :.......|:...|.:.:.||:   ..|..||
  Fly   503 SQP---IMELKRTLTSKLFPTTTADSAM---TTPQTTS 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 19/60 (32%)
C2H2 Zn finger 1328..1349 CDD:275368 7/20 (35%)
C2H2 Zn finger 1357..1377 CDD:275368 4/19 (21%)
C2H2 Zn finger 1386..1407 CDD:275368 8/20 (40%)
zf-H2C2_2 1398..1422 CDD:290200 8/37 (22%)
zf-C2H2 1413..1435 CDD:278523 6/55 (11%)
C2H2 Zn finger 1415..1435 CDD:275368 5/53 (9%)
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 19/79 (24%)
zf-C2H2 311..333 CDD:278523 7/22 (32%)
C2H2 Zn finger 313..333 CDD:275368 7/20 (35%)
zf-H2C2_2 325..349 CDD:290200 9/24 (38%)
C2H2 Zn finger 341..362 CDD:275368 4/20 (20%)
zf-H2C2_2 353..377 CDD:290200 6/23 (26%)
zf-C2H2 368..390 CDD:278523 11/28 (39%)
C2H2 Zn finger 370..390 CDD:275368 10/26 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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