DRSC/TRiP Functional Genomics Resources

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Protein Alignment zld and Cf2

DIOPT Version :9

Sequence 1:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster


Alignment Length:592 Identity:144/592 - (24%)
Similarity:201/592 - (33%) Gaps:175/592 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1047 LILADSLPHSSSSP----TSSSPPPTMPMPLTTITAPQLLPLQPPPPHI-------TSTMP---M 1097
            :|.:.:.|.....|    .|.:|||..|...||.||....|.......|       |:.:|   |
  Fly     1 MIKSTTNPQEQRLPRPEDQSPAPPPPPPSSATTSTAAPATPTHQVATVIANMDTLKTAFLPNLSM 65

  Fly  1098 PPTMHMPIMPPP---PQCYQQLQ---------------PLDPTMSYHTIIGSGPEAHTG------ 1138
            .|.:|:    .|   |.|:||.:               .|:...:..|:.|..|:|...      
  Fly    66 DPNVHV----SPHYCPMCHQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQAQQHPKLSHP 126

  Fly  1139 --TAGGGYSNQITTSDGQILQLMPTSLFAPYAPLSPYSV-AAQRSPQEGDLPPVHTL-TTA-LHA 1198
              .....:.|.:...:...|.....:..:.....|.|.: :|.:.|.|.......:: ||| |.|
  Fly   127 CFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAA 191

  Fly  1199 HQQG--GQQEAQTPTLTVLSTPYSPTVSSSRATPAL---EMDMATLMQHHQDYEMEQ--YQMQHQ 1256
            .|||  .||||              .|:.....||:   :|.:....||||.....:  :|.|||
  Fly   192 GQQGFMEQQEA--------------AVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQ 242

  Fly  1257 QLDQMQQHQQQLDHQQQQQI--LADQTQT---MAQQPLAKKRRGGNATPSTTKRRRNSSVGSTSP 1316
            |..|.||.||:|..|||:::  .|.|.|.   ...|.||..:......|.|.|..:|::.|:...
  Fly   243 QQQQQQQQQQELLEQQQREMQEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNKNANGGAIVS 307

  Fly  1317 H--------------------------------------------STTLPSG-----RIKCLECD 1332
            |                                            :.|:|:.     |.||.:|.
  Fly   308 HPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCP 372

  Fly  1333 KEFTKNCYLTQHNKSFHSG-------EYPFRCQKCGKRFQSEDVYTTHLGRHRTQDKPHKCELCP 1390
            |.|.....|..|.| .|:|       |.|:.|..|||.|...:....|...| |.:||..|..|.
  Fly   373 KTFKTPGTLAMHRK-IHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIH-TGEKPFHCGYCE 435

  Fly  1391 KQFHHKTDLRRHVEAIHTGLKQHMCDICEKGFCRKDHLRKHLETHNRPRVVGKKSAAAAAAAAAA 1455
            |.|..|..|.:|:.. |||.|.:.|..|:|.|.::..|..|                        
  Fly   436 KSFSVKDYLTKHIRT-HTGEKPYTCPYCDKRFTQRSALTVH------------------------ 475

  Fly  1456 AAVTATAGLGGAPAAGSIKAAFARSLTVTAVSSEP---------GAGVAIPSAPATATCAPVSVS 1511
              .|....| |.|..|       |.|.|.|.::.|         |.|...|.:..|.| .|...|
  Fly   476 --TTKLHPLXGRPGGG-------RQLPVPAPAAPPPPTHPPNPSGPGAPPPLSADTDT-DPKKPS 530

  Fly  1512 ASALVQA 1518
            |:|...|
  Fly   531 AAAAASA 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 22/67 (33%)
C2H2 Zn finger 1328..1349 CDD:275368 7/20 (35%)
C2H2 Zn finger 1357..1377 CDD:275368 6/19 (32%)
C2H2 Zn finger 1386..1407 CDD:275368 7/20 (35%)
zf-H2C2_2 1398..1422 CDD:290200 9/23 (39%)
zf-C2H2 1413..1435 CDD:278523 6/21 (29%)
C2H2 Zn finger 1415..1435 CDD:275368 6/19 (32%)
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 37/109 (34%)
C2H2 Zn finger 368..388 CDD:275368 7/20 (35%)
C2H2 Zn finger 403..423 CDD:275368 6/19 (32%)
C2H2 Zn finger 431..451 CDD:275368 7/20 (35%)
zf-H2C2_2 443..468 CDD:316026 10/25 (40%)
C2H2 Zn finger 459..480 CDD:275368 7/46 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457221
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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