DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zld and CG42726

DIOPT Version :9

Sequence 1:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster


Alignment Length:382 Identity:82/382 - (21%)
Similarity:135/382 - (35%) Gaps:90/382 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1266 QQLDHQQQQQILADQTQTMAQQPLAKKRRGGNATPSTTKRRRNSSVGSTSPHSTTLPSG-----R 1325
            :.:|.|:.|:   .|.:|.|.:.:....:|.:.|..      |....|.:.....|..|     :
  Fly    45 RSVDIQETQE---TQARTSADKRIIVTDKGYHCTVC------NKDFRSRTQQYYHLTCGNDLLKK 100

  Fly  1326 IKCLECDKEFTKNCYLTQH---------------NKSF------------HSGEYPFRCQKCGKR 1363
            ..|.||.:.|..:.:|..|               :|||            |:.| ...|..|.|.
  Fly   101 FNCKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQE-KHLCPICQKV 164

  Fly  1364 FQSEDVYTTHLGRHRTQDKPHKCELCPKQFHHKTDLRRHVEAIHTGLKQHMCDICEKGFCRKDHL 1428
            |:.:....:||..|.......|||||.|.|.:|.:|.:|:........:|||.:|:|.|.|:..|
  Fly   165 FRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTL 229

  Fly  1429 RKHLETH---------------NRPRVVGK-----KSAAAAAAAAAAAAVTATAGL--------G 1465
            |.|::.|               |.|..:|:     |:|...........:.....:        .
  Fly   230 RLHMKRHSNRERQSCSLCGKSYNDPDALGRHLRQHKTAERYRCIQCDITINRKDNMLRHLRSMHP 294

  Fly  1466 GAPAAGSIKAAFARSLTVTAVSSE--PGAGVAIPSA-PATATCAPVSVSASALVQAVNPSL--TS 1525
            |...|.:::....||....|.::|  |...|...|. .:.....||.:..|..:.:..|.|  ..
  Fly   295 GCAFASTVEMVTPRSSAQEATTAEERPSQTVRYNSVIQSVGNVEPVMLLQSTPLPSQLPELQMEK 359

  Fly  1526 GLSLKRH--IDDVAVDDD------SLLEEDEDEMEMEMEMDMLEEEDEEEEELGDHH 1574
            |.::..|  :.||..:::      .:|:.|.:|...|...|       .:|....||
  Fly   360 GKAVPEHLPLPDVMPEENVQLYRKIILDLDNEEYSSEPSPD-------AQEPAMQHH 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 21/87 (24%)
C2H2 Zn finger 1328..1349 CDD:275368 9/47 (19%)
C2H2 Zn finger 1357..1377 CDD:275368 6/19 (32%)
C2H2 Zn finger 1386..1407 CDD:275368 9/20 (45%)
zf-H2C2_2 1398..1422 CDD:290200 7/23 (30%)
zf-C2H2 1413..1435 CDD:278523 10/21 (48%)
C2H2 Zn finger 1415..1435 CDD:275368 8/19 (42%)
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 4/25 (16%)
C2H2 Zn finger 103..123 CDD:275368 6/19 (32%)
COG5048 <112..288 CDD:227381 40/176 (23%)
C2H2 Zn finger 131..151 CDD:275368 3/19 (16%)
Chordopox_A33R 151..>254 CDD:283591 31/103 (30%)
C2H2 Zn finger 158..178 CDD:275368 6/19 (32%)
C2H2 Zn finger 187..207 CDD:275368 9/19 (47%)
C2H2 Zn finger 216..236 CDD:275368 8/19 (42%)
C2H2 Zn finger 244..264 CDD:275368 3/19 (16%)
C2H2 Zn finger 272..290 CDD:275368 0/17 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457219
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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