DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12702 and Cip2a

DIOPT Version :9

Sequence 1:NP_001259735.1 Gene:CG12702 / 32993 FlyBaseID:FBgn0031070 Length:870 Species:Drosophila melanogaster
Sequence 2:XP_340983.3 Gene:Cip2a / 360711 RGDID:1310335 Length:909 Species:Rattus norvegicus


Alignment Length:983 Identity:196/983 - (19%)
Similarity:362/983 - (36%) Gaps:276/983 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VREFRMRVACFQVQRSEESLVYVQRSVALLGTKVLPAHFAPTPGNLELARFYVD--------LYA 93
            ::...:.::.::..:||.:...:.|            |.....|. :|.|.:..        |..
  Rat     7 LKSLLLSISQYKAVKSEANATQLLR------------HLEVVSGQ-KLTRLFTSQQILPSECLSC 58

  Fly    94 LMGALKNEGAEGDVLWACVGLVQHCSRNLEARQAVVEHFCFVPLL-GVLIR-HTKRTERVH-RLL 155
            |:..|::......::.:.:.|:...:.:.|.|..:...:....:| ||:.| .|.....|. :.:
  Rat    59 LVELLEDPNISASLILSIISLLSQLAIDNETRDCLQNIYNLNSVLSGVVCRSSTCHNNSVFLQCI 123

  Fly   156 VLLQDLTYGIKIAWEEPFLAALIEHLVGIVLCTEDVSCTASGGSVRDDDDENTMLALSVLVNLCY 220
            .|||.|||.:|.......:..||..|:               |.::..:||.||..|.:|.|||.
  Rat   124 QLLQRLTYNVKFFHSGAHIDDLITFLI---------------GHIQSSEDELTMPCLGLLANLCR 173

  Fly   221 KNFAVLFLFLRSVNISAFCRRIQNYGLLAYKMLIILSEDVYSFQQSELCTFLRLSFAGIEDCLKH 285
            .|.:|........|:.:|.|.:.::  ||:..|.::   |::.   .:.:.|.|:....|.....
  Rat   174 HNLSVQTQIKTLSNVKSFYRTLISF--LAHSSLTVV---VFAL---SILSSLTLNEEVGEKLFHA 230

  Fly   286 WNVAQL-----------------RHIVDFLLDSQSHPGLHRAMLSHGHFCEDFEKLLDQIDTSNG 333
            .|:.|.                 ::.||.|:|...:|.:...:..:.||.....::|..::..: 
  Rat   231 RNIHQTFQLIFNILINGDGTLTRKYSVDLLMDLLKNPKIADYLTRYEHFSSCLNQVLGLLNVKD- 294

  Fly   334 MDVSQEETSKHQQISLGL--VFRLVSYILQMSEE----------ANSCISLDAITPRLYEMVSDW 386
                .:.:||..::.|..  |.:|...:.||..|          :.|..||:.|...|     .|
  Rat   295 ----PDSSSKVLELLLAFCAVTQLRHVLSQMMFEQPPSGNNILGSRSPKSLEPIVALL-----RW 350

  Fly   387 MS-----SDQCGAAAIELI------------C-------TLL----------------------- 404
            :|     :|.|...|:||.            |       |||                       
  Rat   351 LSQPLDGADNCAVLALELFKEIFEDVIDTGNCSSTDRFVTLLLPTILDQLQFTEQNLDETLIKNK 415

  Fly   405 --RLGKRAAVAEMIAND---PSHVAKLVASAERPDTDAGQVLATLRLLIALLQETKTNKVVL--- 461
              |:.|...|...:..|   .:||.|              :|.|::..:.:.|:....|:.|   
  Rat   416 CERMVKAIEVLLTLCGDDTLKTHVVK--------------ILTTMKCSMLIEQQFTYGKIDLGFG 466

  Fly   462 SKISESYFDKILAAPLALVPQFLSTQSLAQCEVEKACFCLLLLVN-----VAGIAKKAYLDKCCT 521
            :|:::|...| |||.:.|.                    .|:|:|     |.|:....|     .
  Rat   467 TKVADSELCK-LAADVILK--------------------TLILMNKLKQLVPGMEVSFY-----K 505

  Fly   522 LLEQPQLQYCLARGMVSKNEALVAA----VLQIAQFEHFPKASVAKHVSA--------------- 567
            :|:.|:|...||..:.|.|...|.:    :|:.|....||...:.:.::|               
  Rat   506 ILQDPRLITPLAFALTSDNREQVQSGLGILLEAAPLPDFPALVLGESIAANNVYRQQETERLPRK 570

  Fly   568 ITSSPGGMMTKASA------VGSDQVEQLRNLSSIFKANRIFTDKDMVQRVNALLDNIGGIVSRN 626
            :|..|......|||      :..|....| |:            :|:::::.|      |::.::
  Rat   571 MTLQPLNHCLSASAKCLTPPLSKDNAPAL-NI------------EDLIEKLQA------GVMVKD 616

  Fly   627 ELASAPTSQVIELYNHRIESLNGTVASLQQRLE-------QAGE-------QLTIGTQQAHVQSA 677
            ::.....|.::::|..::.:|....:.||..||       ||..       |.|....:|...:.
  Rat   617 QINDIRISDIMDVYEMKLSTLASKESRLQDLLEAKALALAQADRLIAQYRCQRTQAETEARTLAG 681

  Fly   678 ELERFQSSNFQLLI-------SQERLQTRCKDLKQQKVELKS---NMTILLKQLSENSVQLQANE 732
            .|...:..|.:|.:       ..||.|...:.|.|...:|:|   ...||.|...|   .:|.||
  Rat   682 MLRDVERKNEELSVLLKSQQLESERAQNDIEHLFQHSKKLESVAEEHEILTKSYME---LVQRNE 743

  Fly   733 RRLTVKKSEIADLQKDCENLRSKLSAKSEELTKLEAHNKENISRIDKLKKSMAAYEQDMTEKLRT 797
               .::|.. ||||..||:|...:....:....|:..|::.|:::  ::|     |:...|....
  Rat   744 ---DMEKKN-ADLQTTCESLNKHIETVKKLNESLKQQNEKTIAQL--IEK-----EEQRKEVQSQ 797

  Fly   798 IGERDRELAKTQKALEEQREACKKSEDLISVLETQLQERKAQIESLEMEQKETEDLRKTIMSLME 862
            :.:|:.:|:...|       ..|..|:.|:||:.:.::::..|:.|..|...||.:||. :|:..
  Rat   798 LVDRECKLSNLHK-------KSKSQEEKINVLQKEKEDKQETIDILRKELSRTEQIRKE-LSIKA 854

  Fly   863 SKKPKRKA 870
            |....:||
  Rat   855 SSLEMQKA 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12702NP_001259735.1 SHE3 633..827 CDD:293683 48/217 (22%)
TMF_DNA_bd 738..793 CDD:289127 13/54 (24%)
PRKG1_interact 787..>855 CDD:292521 15/67 (22%)
DUF4078 <834..870 CDD:290039 9/35 (26%)
Cip2aXP_340983.3 COG1340 633..881 CDD:224259 60/252 (24%)
JAKMIP_CC3 690..872 CDD:292653 49/195 (25%)
RILP-like 810..>895 CDD:304877 17/61 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I9986
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 64 1.000 Inparanoid score I5273
OMA 1 1.010 - - QHG59363
OrthoDB 1 1.010 - - D104936at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23161
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.170

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