DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alr and erv1

DIOPT Version :10

Sequence 1:NP_001259731.1 Gene:Alr / 32991 FlyBaseID:FBgn0031068 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_594974.1 Gene:erv1 / 2543175 PomBaseID:SPAC3G6.08 Length:182 Species:Schizosaccharomyces pombe


Alignment Length:155 Identity:60/155 - (38%)
Similarity:83/155 - (53%) Gaps:12/155 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 DSN---CRTCNDFKSWSK--QQRLISNVQSAKVKHMAAAEKLTV----NAAEDPLPRDDCPLDKV 161
            |.|   |:|||.|.|:..  ||...|.|...|......:::.::    ||..|.:.....| |..
pombe    17 DENGRPCKTCNIFSSFRNVAQQPNSSTVPEVKSNTQLESKQSSIDCNTNAIPDSVSFPRLP-DVA 80

  Fly   162 RLGISTWGLLHTMAAFYSDNPTDTEKRDMKTFFEVLSRLYPCEFCAKDFRTDLDV--NPINVNSQ 224
            .||.|||..||.|||.:..|||.|::.||.:|....|:.|||..||:|.|..:..  |...|:|:
pombe    81 ELGRSTWTFLHAMAANFPKNPTPTQQNDMSSFLYNFSKFYPCWSCAEDLRIWMAKYGNSPRVDSR 145

  Fly   225 KELALWLCKFHNRVNDKLGKPLFDC 249
            :.|..|:|:.||.||::||||||:|
pombe   146 ESLCEWICEAHNDVNERLGKPLFNC 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlrNP_001259731.1 Evr1_Alr 166..257 CDD:461423 40/86 (47%)
erv1NP_594974.1 ERV1 4..182 CDD:227387 60/155 (39%)

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