DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alr and erv2

DIOPT Version :10

Sequence 1:NP_001259731.1 Gene:Alr / 32991 FlyBaseID:FBgn0031068 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_595393.1 Gene:erv2 / 2539721 PomBaseID:SPBC146.04 Length:192 Species:Schizosaccharomyces pombe


Alignment Length:129 Identity:34/129 - (26%)
Similarity:57/129 - (44%) Gaps:20/129 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 VQSAKVKHMAAAEKLTVNAAEDPLPRDDCPLDKVRLGISTWGLLHTMAAFYSDNPTDTEKRDMKT 192
            ::....||......|.|||                    .|.|:||:.:.|.:.||..|:..::.
pombe    54 IEMMSTKHDNNTNNLMVNA--------------------YWKLIHTVVSNYPNRPTLDERDILRH 98

  Fly   193 FFEVLSRLYPCEFCAKDFRTDLDVNPINVNSQKELALWLCKFHNRVNDKLGKPLFDCTKVNERW 256
            :....:...||...:.:.:..|||:|...:|:|....|.||.||::|:|:.:|...|...|||:
pombe    99 YLFSSAITMPCGEYSVELQKILDVHPPQTSSRKAATTWACKVHNQLNEKMNQPKTSCDGFNERY 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlrNP_001259731.1 Evr1_Alr 166..257 CDD:461423 28/91 (31%)
erv2NP_595393.1 ERV1 1..168 CDD:227387 34/129 (26%)

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