DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment parvin and parvab

DIOPT Version :9

Sequence 1:NP_001285464.1 Gene:parvin / 32990 FlyBaseID:FBgn0052528 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001103941.1 Gene:parvab / 567123 ZFINID:ZDB-GENE-070424-60 Length:367 Species:Danio rerio


Alignment Length:360 Identity:206/360 - (57%)
Similarity:269/360 - (74%) Gaps:4/360 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PKSPHTPTAIKKGEKEDSFWDKF-STLGRKRGTREVKKVQEEGKYAIDSPGSPSQYDIPPEDYAL 70
            |.||.:|::.|   |:|||..|. .||.|::..:||.::||||..||:.|.||:.:::.|||..|
Zfish     9 PSSPKSPSSRK---KDDSFLGKLGGTLARRKKAKEVSELQEEGMNAINLPLSPTPFELDPEDTML 70

  Fly    71 REHEQRAVIDPQSISDPQVIKLQRILVDWINDELAEQRIIVQHLEEDMYDGQVLHKLWEKLTGKK 135
            .|:|.|.::||.|.:||::.:|.::|:|||||.|..:||||:.|.||:||||||.||:|||.|:|
Zfish    71 DENEVRTMVDPHSRNDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLEGEK 135

  Fly   136 LDVPEVTQSEQGQHEKLNIVLKAVNHTLGFHQKIPKWSVASVHSKNIVAILHLLVALVRHFRAPV 200
            |:|.||||.|..|.:||..||:.:|.||....:..:|:|.|||:||||||||||||:.:|||||:
Zfish   136 LNVAEVTQCEIAQKQKLQTVLEKINDTLKVSSRNIRWNVESVHAKNIVAILHLLVAISQHFRAPI 200

  Fly   201 RLPENVFVTVVIAEKNAGVLNAQKFQEQITSEYDDLGMRCEKDAFDTLIDCAPDKLAVVKKSLIT 265
            ||||:|.:.||:.:|..|:|.:::.||:||..::.|..|.|:||||||.|.|||||.||||:|||
Zfish   201 RLPEHVSIQVVVVQKREGILQSRQIQEEITGNFEALSGRYERDAFDTLFDHAPDKLNVVKKTLIT 265

  Fly   266 FVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGGFFVPLHEFHLTPQDVDQMVSNVAFAFDLMQ 330
            ||||||.|||.|:|:|.|.|.|||||.||||||.|:||||:.|.|.|:..|..|.||||:|:|||
Zfish   266 FVNKHLNKLNLEVSELETQFADGVYLVLLMGLLEGYFVPLYNFFLIPEHFDHKVHNVAFSFELMQ 330

  Fly   331 DVGLPKPKARPEDIVNMDLKSTLRVLYSLFTMFRD 365
            |..|.|||.|||||||.||||||||||:|||.:|:
Zfish   331 DGDLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRN 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parvinNP_001285464.1 CH 92..192 CDD:278723 59/99 (60%)
CH 258..359 CDD:278723 72/100 (72%)
parvabNP_001103941.1 CH 91..192 CDD:278723 59/100 (59%)
CH 258..359 CDD:278723 72/100 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578636
Domainoid 1 1.000 154 1.000 Domainoid score I4212
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 403 1.000 Inparanoid score I1875
OMA 1 1.010 - - QHG52959
OrthoDB 1 1.010 - - D373611at33208
OrthoFinder 1 1.000 - - FOG0002943
OrthoInspector 1 1.000 - - otm24706
orthoMCL 1 0.900 - - OOG6_105758
Panther 1 1.100 - - O PTHR12114
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2710
SonicParanoid 1 1.000 - - X1944
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.