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Protein Alignment parvin and macf1a
DIOPT Version :9
Sequence 1: | NP_001285464.1 |
Gene: | parvin / 32990 |
FlyBaseID: | FBgn0052528 |
Length: | 367 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017207777.1 |
Gene: | macf1a / 562190 |
ZFINID: | ZDB-GENE-030131-3606 |
Length: | 8259 |
Species: | Danio rerio |
Alignment Length: | 138 |
Identity: | 38/138 - (27%) |
Similarity: | 62/138 - (44%) |
Gaps: | 22/138 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 EKEDSFWDKFSTLGRKRGTREVKKVQEEGKYAIDSPGSPSQYDIPPEDYALREHEQ-RAVIDPQ- 82
::..|...|.|.||.: :..:||..::..|..||...: |...|| :::..|.
Zfish 4682 QRYGSLHSKSSELGTR-----LSSLQERYQHYQDEAGSLDSW--------LNSQEQNQSIFKPSG 4733
Fly 83 SISDPQVIKLQRIL--VDWINDELAEQRIIVQHLEEDMYDGQVLHKLWEKLTGKKLDVPEVTQSE 145
..:|||. |||.| |..:.|:|||:.: .||:....|:.|..:.|..|.|..|:..||.:.
Zfish 4734 EQTDPQA--LQRTLSTVQLLQDDLAERSV---QLEKVKRAGKELVSIKESPTLKNADIKNVTDAL 4793
Fly 146 QGQHEKLN 153
:.:.|.|:
Zfish 4794 EKRFETLS 4801
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
parvin | NP_001285464.1 |
CH |
92..192 |
CDD:278723 |
21/64 (33%) |
CH |
258..359 |
CDD:278723 |
|
macf1a | XP_017207777.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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