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Protein Alignment parvin and actn4
DIOPT Version :9
Sequence 1: | NP_001285464.1 |
Gene: | parvin / 32990 |
FlyBaseID: | FBgn0052528 |
Length: | 367 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017951705.1 |
Gene: | actn4 / 448522 |
XenbaseID: | XB-GENE-494339 |
Length: | 926 |
Species: | Xenopus tropicalis |
Alignment Length: | 146 |
Identity: | 39/146 - (26%) |
Similarity: | 69/146 - (47%) |
Gaps: | 26/146 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 223 QKFQEQITSEYDDLGMRCEKDAFDTLIDCAPDKLAVVKKSLITFVNKHLAKLNFEISDLNTDFRD 287
|::.|| ..::|. |.|:|.|.:|.. :|:...:.|.||.|...:|.:::.||||
Frog 22 QRYMEQ-EEDWDR----------DLLLDPAWEKQQ--RKTFTAWCNSHLRKAGTQIENIDEDFRD 73
Fly 288 GVYLCLLMGLLGGFFVPLHE-----FHLTPQDVDQMVSNVAFAFDLMQDVGLPKPKARPEDIVNM 347
|:.|.||:.::.|..:|..| .| .::||..|.|.:...|:.......|:||:.
Frog 74 GLKLMLLLEVISGERLPKPERGKMRVH--------KINNVNKALDFIASKGVKLVSIGAEEIVDG 130
Fly 348 DLKSTLRVLYSLFTMF 363
:.|.||.:::::...|
Frog 131 NTKMTLGMIWTIILRF 146
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
parvin | NP_001285464.1 |
CH |
92..192 |
CDD:278723 |
|
CH |
258..359 |
CDD:278723 |
29/105 (28%) |
actn4 | XP_017951705.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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