DRSC/TRiP Functional Genomics Resources

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Protein Alignment parvin and parvb

DIOPT Version :9

Sequence 1:NP_001285464.1 Gene:parvin / 32990 FlyBaseID:FBgn0052528 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001005624.1 Gene:parvb / 448070 XenbaseID:XB-GENE-947900 Length:365 Species:Xenopus tropicalis


Alignment Length:363 Identity:206/363 - (56%)
Similarity:263/363 - (72%) Gaps:11/363 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLNRPKSPHTPTAIKKGEKEDSFWDKF-STLGRKRGTREVKKVQEEGKYAIDSPGSPSQYDIPPE 66
            ||..||.          .|::||..|. .||.||:..:||..:|||||.||::|.||:..|:.||
 Frog    10 TLQGPKM----------RKDESFLGKLGGTLVRKKKAKEVSDLQEEGKNAINAPMSPTPIDLHPE 64

  Fly    67 DYALREHEQRAVIDPQSISDPQVIKLQRILVDWINDELAEQRIIVQHLEEDMYDGQVLHKLWEKL 131
            |..|.|:|:|.:|||.|..:.:..:|.::|:||||:.|.|:||||::||||:||||||.||.|.|
 Frog    65 DTLLEENEERTMIDPNSKEEAKFKELVKVLIDWINEVLVEERIIVKNLEEDLYDGQVLQKLLETL 129

  Fly   132 TGKKLDVPEVTQSEQGQHEKLNIVLKAVNHTLGFHQKIPKWSVASVHSKNIVAILHLLVALVRHF 196
            ..:||:|.||||||.||.:||..||:||...|.......:|:|.|:|.||:||||||||||..||
 Frog   130 GSRKLNVAEVTQSEIGQKQKLQTVLEAVQELLRPQGWAIRWNVDSIHGKNLVAILHLLVALAMHF 194

  Fly   197 RAPVRLPENVFVTVVIAEKNAGVLNAQKFQEQITSEYDDLGMRCEKDAFDTLIDCAPDKLAVVKK 261
            |||:||||:|.|.||:.:|..|:|......|::|:..:.:..:.|:||||||.|.|||||:||||
 Frog   195 RAPIRLPEHVCVQVVVVKKREGLLQTAHVTEELTTTTEMMMGKFERDAFDTLFDHAPDKLSVVKK 259

  Fly   262 SLITFVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGGFFVPLHEFHLTPQDVDQMVSNVAFAF 326
            ||||||||||.|||.|:::|.|.|.|||||.||||||.|:|||||.|:|||:..:|.|.||||:|
 Frog   260 SLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHNFYLTPEGFEQKVHNVAFSF 324

  Fly   327 DLMQDVGLPKPKARPEDIVNMDLKSTLRVLYSLFTMFR 364
            :||||.||.|||||||||||:||||||||||:|||.::
 Frog   325 ELMQDGGLKKPKARPEDIVNLDLKSTLRVLYNLFTKYK 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parvinNP_001285464.1 CH 92..192 CDD:278723 58/99 (59%)
CH 258..359 CDD:278723 76/100 (76%)
parvbNP_001005624.1 CH 89..196 CDD:366016 62/106 (58%)
CH 256..362 CDD:366016 79/105 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 161 1.000 Domainoid score I3973
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H8342
Inparanoid 1 1.050 397 1.000 Inparanoid score I1903
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373611at33208
OrthoFinder 1 1.000 - - FOG0002943
OrthoInspector 1 1.000 - - otm48015
Panther 1 1.100 - - LDO PTHR12114
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2710
SonicParanoid 1 1.000 - - X1944
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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