DRSC/TRiP Functional Genomics Resources

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Protein Alignment parvin and parvb

DIOPT Version :9

Sequence 1:NP_001285464.1 Gene:parvin / 32990 FlyBaseID:FBgn0052528 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_956020.1 Gene:parvb / 325686 ZFINID:ZDB-GENE-030131-4411 Length:365 Species:Danio rerio


Alignment Length:367 Identity:200/367 - (54%)
Similarity:266/367 - (72%) Gaps:6/367 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLNRPKSPHTPTAIKKGEKEDSFWDKF-STLGRKRGTREVKKVQEEGKYAIDSPGSPSQYDIP 64
            |:| |..:|...|.   |.:|::|...|. .||.||:..:||..:|||||.||::|...:..::.
Zfish     1 MAT-NATRSTGQPA---KTKKDESLLGKLGGTLVRKKKIKEVSDLQEEGKNAINAPLLHTSPELL 61

  Fly    65 PEDYALREHEQRAVIDPQSISDPQVIKLQRILVDWINDELAEQRIIVQHLEEDMYDGQVLHKLWE 129
            |||..|.|:.:|.::||.|..|.....||::|:||||.||.|.||||:.||||:||||||.||:|
Zfish    62 PEDTLLEENAERTILDPTSREDLNFKDLQKVLIDWINSELEEDRIIVKDLEEDLYDGQVLQKLFE 126

  Fly   130 KLTGKKLDVPEVTQSEQGQHEKLNIVLKAVNHTLGFHQKIPKWSVASVHSKNIVAILHLLVALVR 194
            ||:|.||:|.||||||.||.:||..||:|||..|.......:|||.|:||||:|:|::||:||..
Zfish   127 KLSGYKLNVAEVTQSEIGQKQKLQTVLEAVNGVLRPLDWNTEWSVDSIHSKNLVSIVYLLLALAI 191

  Fly   195 HFRAPVRLPENVFVTVVIAEKNAGVLNAQKFQEQITSEYDDLGM-RCEKDAFDTLIDCAPDKLAV 258
            ::.||:||||:|.|.|::.:|..|:|......:|:||...::.: |.|:||||||:|.|||||.|
Zfish   192 YYAAPIRLPEHVSVQVIVVKKKEGILQTAHVTKQLTSTTTEMMIGRSERDAFDTLLDHAPDKLNV 256

  Fly   259 VKKSLITFVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGGFFVPLHEFHLTPQDVDQMVSNVA 323
            ||.||||||||||.|||.|:::|.|.|.|||||.||||||..:||||:.|:|||::.:|.|.|||
Zfish   257 VKTSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLENYFVPLYNFYLTPENFEQKVHNVA 321

  Fly   324 FAFDLMQDVGLPKPKARPEDIVNMDLKSTLRVLYSLFTMFRD 365
            |||:||||.||.||||||||:||::|||||||||:|||.:::
Zfish   322 FAFELMQDGGLQKPKARPEDVVNLNLKSTLRVLYNLFTNYKN 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parvinNP_001285464.1 CH 92..192 CDD:278723 61/99 (62%)
CH 258..359 CDD:278723 72/100 (72%)
parvbNP_956020.1 CH 89..189 CDD:278723 61/99 (62%)
CH 256..357 CDD:278723 72/100 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578635
Domainoid 1 1.000 154 1.000 Domainoid score I4212
eggNOG 1 0.900 - - E1_KOG3631
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8342
Inparanoid 1 1.050 403 1.000 Inparanoid score I1875
OMA 1 1.010 - - QHG52959
OrthoDB 1 1.010 - - D373611at33208
OrthoFinder 1 1.000 - - FOG0002943
OrthoInspector 1 1.000 - - otm24706
orthoMCL 1 0.900 - - OOG6_105758
Panther 1 1.100 - - LDO PTHR12114
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2710
SonicParanoid 1 1.000 - - X1944
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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