DRSC/TRiP Functional Genomics Resources

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Protein Alignment parvin and Sptbn2

DIOPT Version :9

Sequence 1:NP_001285464.1 Gene:parvin / 32990 FlyBaseID:FBgn0052528 Length:367 Species:Drosophila melanogaster
Sequence 2:XP_008758314.1 Gene:Sptbn2 / 29211 RGDID:3751 Length:2395 Species:Rattus norvegicus


Alignment Length:329 Identity:79/329 - (24%)
Similarity:133/329 - (40%) Gaps:85/329 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SPG----SPSQYDIPPEDYALREHEQRAVIDP--QSISDPQVIKLQRILVDWINDELAEQRIIVQ 112
            :||    ||:.: |.|..||       :|::.  :.:.|.:....::....|:|..||.....|.
  Rat    30 NPGGILLSPAAF-INPAQYA-------SVLEGRFKQLQDEREAVQKKTFTKWVNSHLARVTCRVG 86

  Fly   113 HLEEDMYDGQVLHKLWEKLTGKKLDVPEVTQSEQGQHEKLNIVLKAVNHTLGF--HQKIPKWSVA 175
            .|..|:.||:.|.:|.|.|:|:.|  |:.|:.....|     .|:.|:..|.|  .||:   .:.
  Rat    87 DLYSDLRDGRNLLRLLEVLSGETL--PKPTKGRMRIH-----CLENVDKALQFLKEQKV---HLE 141

  Fly   176 SVHSKNIVAILHLLVALVRHFRAPVRLPENVFVTVVIAEKNAGVLNAQKFQ-EQITSEYDDLGMR 239
            ::.|.:||...|             ||...:..|:::           :|| :.|:.|.:|  .:
  Rat   142 NMGSHDIVDGNH-------------RLTLGLVWTIIL-----------RFQIQDISVETED--NK 180

  Fly   240 CEKDAFDTLIDCAPDKLAVVKKSLITFVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGGFFVP 304
            .:|.|.|.|:.....|.|....     ||.|    ||     .|.:|||:          .|...
  Rat   181 EKKSAKDALLLWCQMKTAGYPN-----VNVH----NF-----TTSWRDGL----------AFNAI 221

  Fly   305 LHEFHLTPQDVDQMVS-----NVAFAFDLMQ-DVGLPKPKARPEDIVNMDLKSTLRVLYSLFTMF 363
            :|:......|.:.:..     |:..||:|.: ::||.| ...||| ||:|......::..:.|.:
  Rat   222 VHKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLTK-LLDPED-VNVDQPDEKSIITYVATYY 284

  Fly   364 RDFA 367
            ..|:
  Rat   285 HYFS 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parvinNP_001285464.1 CH 92..192 CDD:278723 28/101 (28%)
CH 258..359 CDD:278723 25/106 (24%)
Sptbn2XP_008758314.1 CH 68..166 CDD:214479 31/131 (24%)
CH 184..287 CDD:237981 31/128 (24%)
Spectrin 312..421 CDD:278843
Spectrin 436..529 CDD:278843
SPEC 541..753 CDD:238103
SPEC 756..965 CDD:238103
SPEC 968..1179 CDD:238103
SPEC 1181..1390 CDD:238103
SPEC 1391..1595 CDD:238103
SPEC 1596..1808 CDD:238103
SPEC 1809..2017 CDD:238103
SPEC 2025..>2082 CDD:197544
PH_beta_spectrin 2228..2331 CDD:269975
PH 2249..2331 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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