DRSC/TRiP Functional Genomics Resources

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Protein Alignment parvin and Pop7

DIOPT Version :9

Sequence 1:NP_001285464.1 Gene:parvin / 32990 FlyBaseID:FBgn0052528 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001099388.1 Gene:Pop7 / 288564 RGDID:1306413 Length:140 Species:Rattus norvegicus


Alignment Length:23 Identity:12/23 - (52%)
Similarity:14/23 - (60%) Gaps:6/23 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 LPKPKARPEDI-VNM--DLKSTL 353
            ||:   ||.|| |||  |.|:.|
  Rat    30 LPR---RPNDIYVNMKTDFKAQL 49

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parvinNP_001285464.1 CH 92..192 CDD:278723
CH 258..359 CDD:278723 12/23 (52%)
Pop7NP_001099388.1 Rpp20 33..133 CDD:372048 10/17 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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