DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment parvin and Parvb

DIOPT Version :9

Sequence 1:NP_001285464.1 Gene:parvin / 32990 FlyBaseID:FBgn0052528 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_573395.1 Gene:Parvb / 170736 MGIID:2153063 Length:365 Species:Mus musculus


Alignment Length:360 Identity:216/360 - (60%)
Similarity:268/360 - (74%) Gaps:3/360 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PKSPHTPTAIKKGEKEDSFWDKF-STLGRKRGTREVKKVQEEGKYAIDSPGSPSQYDIPPEDYAL 70
            |:|| ||.| .|.:|::||..|. .||.||:.||||..:|||||.||:||.:|:..||.|||..|
Mouse     6 PRSP-TPRA-PKMKKDESFLGKLGGTLARKKKTREVTDLQEEGKSAINSPMAPALVDIHPEDTQL 68

  Fly    71 REHEQRAVIDPQSISDPQVIKLQRILVDWINDELAEQRIIVQHLEEDMYDGQVLHKLWEKLTGKK 135
            .|:|:|.:|||.|..||:..:|.::|:|||||.|||:||||:.||||:||||||.||.|||...|
Mouse    69 EENEERTMIDPTSREDPKFKELVKVLLDWINDVLAEERIIVKQLEEDLYDGQVLQKLLEKLAHCK 133

  Fly   136 LDVPEVTQSEQGQHEKLNIVLKAVNHTLGFHQKIPKWSVASVHSKNIVAILHLLVALVRHFRAPV 200
            |:|.||||||.||.:||..||:||...|..|....:|:|.|:|.||:||||||||:|..|||||:
Mouse   134 LNVAEVTQSEIGQKQKLQTVLEAVQDLLRPHGWPLRWNVDSIHGKNLVAILHLLVSLAMHFRAPI 198

  Fly   201 RLPENVFVTVVIAEKNAGVLNAQKFQEQITSEYDDLGMRCEKDAFDTLIDCAPDKLAVVKKSLIT 265
            .|||:|.|.||:..|..|:|::....|::|:..:.:..|.|:||||||.|.|||||.:|||||||
Mouse   199 HLPEHVTVQVVVVRKREGLLHSSHISEELTTTTEIMMGRFERDAFDTLFDHAPDKLNLVKKSLIT 263

  Fly   266 FVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGGFFVPLHEFHLTPQDVDQMVSNVAFAFDLMQ 330
            ||||||.|||.|::||.|.|.|||||.||:|||..:|||||.|:|||...||.|.||||||:||.
Mouse   264 FVNKHLNKLNLEVTDLETQFADGVYLVLLLGLLEDYFVPLHNFYLTPDSFDQKVHNVAFAFELML 328

  Fly   331 DVGLPKPKARPEDIVNMDLKSTLRVLYSLFTMFRD 365
            |.||.||||||||:||:||||||||||:|||.::|
Mouse   329 DGGLKKPKARPEDVVNLDLKSTLRVLYTLFTKYKD 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parvinNP_001285464.1 CH 92..192 CDD:278723 62/99 (63%)
CH 258..359 CDD:278723 74/100 (74%)
ParvbNP_573395.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 26/47 (55%)
CH 89..190 CDD:278723 62/100 (62%)
CH 257..357 CDD:278723 74/99 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835434
Domainoid 1 1.000 158 1.000 Domainoid score I4115
eggNOG 1 0.900 - - E1_KOG3631
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8342
Inparanoid 1 1.050 406 1.000 Inparanoid score I1873
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52959
OrthoDB 1 1.010 - - D373611at33208
OrthoFinder 1 1.000 - - FOG0002943
OrthoInspector 1 1.000 - - otm42893
orthoMCL 1 0.900 - - OOG6_105758
Panther 1 1.100 - - LDO PTHR12114
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2710
SonicParanoid 1 1.000 - - X1944
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

Return to query results.
Submit another query.