DRSC/TRiP Functional Genomics Resources

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Protein Alignment parvin and parva

DIOPT Version :9

Sequence 1:NP_001285464.1 Gene:parvin / 32990 FlyBaseID:FBgn0052528 Length:367 Species:Drosophila melanogaster
Sequence 2:XP_031756266.1 Gene:parva / 101730687 XenbaseID:XB-GENE-959785 Length:372 Species:Xenopus tropicalis


Alignment Length:359 Identity:208/359 - (57%)
Similarity:265/359 - (73%) Gaps:2/359 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PKSPHTPTAIKKGEKEDSFWDKF-STLGRKRGTREVKKVQEEGKYAIDSPGSPSQYDIPPEDYAL 70
            |||| ||.:....:|:|||..|. .||.|::..:||.::||||..||:.|.:|..:::.|||..|
 Frog    12 PKSP-TPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSELQEEGINAINLPLNPIPFELDPEDTML 75

  Fly    71 REHEQRAVIDPQSISDPQVIKLQRILVDWINDELAEQRIIVQHLEEDMYDGQVLHKLWEKLTGKK 135
            .|:|.|.:|||.|.||.::.:|.|:|:|||||.|..:||||:.|.|||||||||.||:|||.|:|
 Frog    76 EENEVRTMIDPYSRSDARLQELMRVLIDWINDVLVGERIIVKDLAEDMYDGQVLQKLFEKLEGEK 140

  Fly   136 LDVPEVTQSEQGQHEKLNIVLKAVNHTLGFHQKIPKWSVASVHSKNIVAILHLLVALVRHFRAPV 200
            |:|.||||||..|.:||..||:.:|.||....:..||:|.|:|:|::||||||||||.::||||:
 Frog   141 LNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSVKWNVDSIHAKSVVAILHLLVALSQYFRAPI 205

  Fly   201 RLPENVFVTVVIAEKNAGVLNAQKFQEQITSEYDDLGMRCEKDAFDTLIDCAPDKLAVVKKSLIT 265
            |||::|.:.||:.:|..|:|..:..||:||.:.:.|..|.|:||||||.|.|||||.||||:|||
 Frog   206 RLPDHVSIQVVVVQKLDGMLQTRHIQEEITGDTEALSGRHERDAFDTLFDHAPDKLNVVKKTLIT 270

  Fly   266 FVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGGFFVPLHEFHLTPQDVDQMVSNVAFAFDLMQ 330
            ||||||.|||.|:::|.|.|.|||||.||||||.|:||||..|.|||...:|.|.||.|||:|||
 Frog   271 FVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLFNFFLTPDSFEQKVLNVTFAFELMQ 335

  Fly   331 DVGLPKPKARPEDIVNMDLKSTLRVLYSLFTMFR 364
            |.||.|||.|||||||.||||||||||:|||.:|
 Frog   336 DGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parvinNP_001285464.1 CH 92..192 CDD:278723 60/99 (61%)
CH 258..359 CDD:278723 73/100 (73%)
parvaXP_031756266.1 CH_PARVA_rpt1 91..205 CDD:409184 66/113 (58%)
CH_PARVA_rpt2 244..372 CDD:409186 91/126 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 161 1.000 Domainoid score I3973
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 397 1.000 Inparanoid score I1903
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373611at33208
OrthoFinder 1 1.000 - - FOG0002943
OrthoInspector 1 1.000 - - otm48015
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1944
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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