DRSC/TRiP Functional Genomics Resources

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Protein Alignment parvin and parvg

DIOPT Version :9

Sequence 1:NP_001285464.1 Gene:parvin / 32990 FlyBaseID:FBgn0052528 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001083007.1 Gene:parvg / 100037387 ZFINID:ZDB-GENE-070410-67 Length:315 Species:Danio rerio


Alignment Length:304 Identity:125/304 - (41%)
Similarity:183/304 - (60%) Gaps:4/304 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EDYALRE-HEQRAVIDPQSISDPQVIKLQRILVDWINDELAEQRIIVQHLEEDMYDGQVLHKLWE 129
            :|::.|: .|:|.:|.|.|:.||:||||:.:|:||||..|..:.|:|:.||||:|||.|||.|..
Zfish    11 DDFSNRQGGEKRMIIQPTSLEDPKVIKLKEVLLDWINSTLKVEHIVVRSLEEDLYDGLVLHHLLR 75

  Fly   130 KLTGKKLDVPEVTQSEQGQHEKLNIVLKAVNHTLGFHQKIPKWSVASVHSKNIVAILHLLVALVR 194
            :..|..|.|.|:..|...|..||.::|||:|.||..:....||||..:||::::|.||||||:||
Zfish    76 RSAGIDLHVEEIALSTGAQIRKLEVILKALNETLELNVDQAKWSVKLIHSRDLLATLHLLVAIVR 140

  Fly   195 HFRAPVRLPENVFVTVVIAEKNAGVLNAQKFQEQIT--SEYDDLGMRCEKDA-FDTLIDCAPDKL 256
            .|:..:.||.||.|.::..|.....:.|.|..|.||  ...::|.....|:. .|.|......|:
Zfish   141 RFQPDLVLPANVTVELIQCEVTKSGIKADKQTEFITFSESSNELDRESNKECPIDELFKLEAHKI 205

  Fly   257 AVVKKSLITFVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGGFFVPLHEFHLTPQDVDQMVSN 321
            ..|||:::.||||::|.|...::||:..|.|||.|.||:|.|..||:||.:|.|.|....:|:.|
Zfish   206 ETVKKAILHFVNKNMASLGLNVTDLDKQFADGVILLLLIGQLEDFFIPLCDFFLCPVSSSEMLHN 270

  Fly   322 VAFAFDLMQDVGLPKPKARPEDIVNMDLKSTLRVLYSLFTMFRD 365
            |..|.||:.|.|.|.....|:|||:.|:.:|::|||.||...::
Zfish   271 VTLALDLLIDRGFPVQSVDPQDIVSQDVPATVKVLYYLFNRHKN 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parvinNP_001285464.1 CH 92..192 CDD:278723 46/99 (46%)
CH 258..359 CDD:278723 45/100 (45%)
parvgNP_001083007.1 CH 38..138 CDD:278723 46/99 (46%)
CH 208..310 CDD:278723 46/101 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578637
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52959
OrthoDB 1 1.010 - - D373611at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12114
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.860

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