DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-1-2beta and ap2b1

DIOPT Version :10

Sequence 1:NP_523415.1 Gene:AP-1-2beta / 32987 FlyBaseID:FBgn0010380 Length:921 Species:Drosophila melanogaster
Sequence 2:XP_012812114.1 Gene:ap2b1 / 394814 XenbaseID:XB-GENE-5871354 Length:958 Species:Xenopus tropicalis


Alignment Length:970 Identity:688/970 - (70%)
Similarity:792/970 - (81%) Gaps:62/970 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDSKYFTTTKKGEIFELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLEL 65
            |||||||||.|||||||||:||||:||||:|||||||||:||||||||:||||||||||||||||
 Frog     1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLEL 65

  Fly    66 KKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130
            ||||||||||||||||||||||||:|||||||.||||||||||||||||||||||||||||||||
 Frog    66 KKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130

  Fly   131 KDEDPYVRKTAAVCVAKLYDISATMVEDQGFLDQLKDLLSDSNPMVVANAVAALSEINEASQSGQ 195
            ||||||||||||||||||:||:|.|||||||||.|:||::|||||||||||||||||:| |....
 Frog   131 KDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE-SHPNS 194

  Fly   196 PLVEMNSVTINKLLTALNECTEWGQVFILDSLANYSPKDEREAQSICERITPRLAHANAAVVLSA 260
            .|:::|...||||||||||||||||:||||.|:||:|||||||||||||:||||:|||:||||||
 Frog   195 NLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSICERVTPRLSHANSAVVLSA 259

  Fly   261 VKVLMKLLEMLSSDSDFCATLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVF 325
            ||||||.||:|..|||:...|.||||||||||||.||||||||||||||||||||:|||.|:|||
 Frog   260 VKVLMKFLELLPKDSDYYTMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVF 324

  Fly   326 FVKYNDPIYVKLEKLDIMIRLANQSNIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAE 390
            ||||||||||||||||||||||:|:||||||:|||||||||||||||||||||||||||||.|||
 Frog   325 FVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAE 389

  Fly   391 RCVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESIISTLCENLDTLDEPEARASMVWIIGE 455
            |||||||||||||||||||||||||:||||||||||||||:|||||||:||||:||.:|:||:||
 Frog   390 RCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARGAMIWIVGE 454

  Fly   456 YAERIDNADELLDSFLEGFQDENAQVQLQLLTAVVKLFLKRPSDTQELVQHVLSLATQDSDNPDL 520
            ||||||||||||:||||||.||:.||||.||||:||||||:||:||||||.||||||||||||||
 Frog   455 YAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDL 519

  Fly   521 RDRGFIYWRLLSTDPAAAKEVVLADKPLISEETDLLEPTLLDELICHISSLASVYHKPPTAFVEG 585
            ||||:||||||||||..||||||::||||||||||:||||||||||||.||||||||||.|||||
 Frog   520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEG 584

  Fly   586 RGAGVRKSLPNRAAGS------------AAGAEQAENAAGSEAMVIPNQESLIGDLLSMDINAPA 638
            .....||.||.: .||            :||.||.:        |||:|..|:||||::|:..|.
 Frog   585 SHGVHRKHLPIQ-HGSIDIGDSPVGPTPSAGLEQPQ--------VIPSQGDLLGDLLNLDLGPPG 640

  Fly   639 MPSAPAATS----NVDLLGGGLDIL---------------LGGPPA----------------EAA 668
              :.|..::    .|||||||||.|               :||.||                ...
 Frog   641 --NVPQVSTMQMGAVDLLGGGLDSLMGEDTQWLGSDLGGGIGGSPAVGQTFIPSSVPATFAPSPT 703

  Fly   669 PGGATSLLGDIFGL-GGATLSVGVQI-PKVTWLPAEKGKGLEIQGTFSRRNGEVFMDMTLTNKAM 731
            |...:|.|.|:|.| .|..::.|..: .|..||||.|.|||||.||||.|...::|||:.||||:
 Frog   704 PAVVSSGLNDLFELSSGIGMAPGGYVSQKAVWLPAVKAKGLEISGTFSHRQAHIYMDMSFTNKAL 768

  Fly   732 QPMTNFAIQLNKNSFGLVPASPMQA-APLPPNQSIEVSMALGTNGPIQRMEPLNNLQVAVKNNID 795
            |.||:||||.||||||::|::|:.. .||.|||||::|:.|.|.||:.:||||||||||||||||
 Frog   769 QHMTDFAIQFNKNSFGVIPSAPLAIHTPLMPNQSIDISLPLNTLGPVMKMEPLNNLQVAVKNNID 833

  Fly   796 IFYFACLVHGNVLFAEDGQLDKRVFLNTWKEIPAANELQYTLSGVIGTTDGIASKMTTNNIFTIA 860
            :|||:||:..:|||.|||:::::|||.|||:||..||||:.:.......|.::||:..||::|||
 Frog   834 VFYFSCLIPLHVLFVEDGKMERQVFLATWKDIPNENELQFQIKDCHLNADTVSSKLQNNNVYTIA 898

  Fly   861 KRNVEGQDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRSVEVANIIFAAYEAIIRS 920
            ||||||||||||||||||.||:|.||::|||||..|||||.|:.||.|.::..|::|:::
 Frog   899 KRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVCNYVYQVYDSILKN 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1-2betaNP_523415.1 Adaptin_N 38..535 CDD:396262 430/496 (87%)
HEAT repeat 51..75 CDD:293787 23/23 (100%)
HEAT repeat 87..114 CDD:293787 24/26 (92%)
HEAT repeat 121..151 CDD:293787 28/29 (97%)
HEAT repeat 160..186 CDD:293787 21/25 (84%)
HEAT repeat 197..229 CDD:293787 23/31 (74%)
HEAT repeat 393..417 CDD:293787 23/23 (100%)
HEAT repeat 429..458 CDD:293787 21/28 (75%)
HEAT repeat 465..495 CDD:293787 23/29 (79%)
HEAT repeat 506..542 CDD:293787 31/35 (89%)
Alpha_adaptinC2 703..799 CDD:197886 62/96 (65%)
B2-adapt-app_C 809..919 CDD:198088 63/109 (58%)
ap2b1XP_012812114.1 Adaptin_N 11..534 CDD:396262 454/523 (87%)
HEAT repeat 51..75 CDD:293787 23/23 (100%)
HEAT repeat 87..114 CDD:293787 24/26 (92%)
HEAT repeat 121..151 CDD:293787 28/29 (97%)
HEAT repeat 160..186 CDD:293787 21/25 (84%)
HEAT repeat 197..228 CDD:293787 22/30 (73%)
HEAT repeat 392..416 CDD:293787 23/23 (100%)
HEAT repeat 428..457 CDD:293787 21/28 (75%)
HEAT repeat 464..494 CDD:293787 23/29 (79%)
HEAT repeat 505..541 CDD:293787 31/35 (89%)
Alpha_adaptinC2 738..838 CDD:197886 64/99 (65%)
B2-adapt-app_C 847..957 CDD:198088 63/109 (58%)

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