Sequence 1: | NP_523415.1 | Gene: | AP-1-2beta / 32987 | FlyBaseID: | FBgn0010380 | Length: | 921 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101002.2 | Gene: | Ap3b2 / 308777 | RGDID: | 1308950 | Length: | 1082 | Species: | Rattus norvegicus |
Alignment Length: | 1102 | Identity: | 271/1102 - (24%) |
---|---|---|---|
Similarity: | 449/1102 - (40%) | Gaps: | 242/1102 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 DSKYFTTTKKGEIF--------ELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQ 59
Fly 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCE 124
Fly 125 PLRKCLKDEDPYVRKTAAVCVAKLYDISATMVEDQGFLDQLKDLLSDSNPMVVANAVAALSEINE 189
Fly 190 ASQSGQPLVEMNSVTINKLLTALNECTEWGQVFILDSLANY------------------------ 230
Fly 231 -SPKDEREAQSICERIT-----------------------PRLAHANAAVVLSAVKVLMKLLEML 271
Fly 272 SSDSDFCATLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 336
Fly 337 LEKLDIMIRLANQSNIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAERCVSTLLDLIQ 401
Fly 402 TKVNYVVQEAIVVIKDIFRKYPNKYESIISTLCENLDTLDEPEARASMVWIIGEYAERIDN-ADE 465
Fly 466 LLDSFLEGFQDENAQVQLQLLTAVVKLFLKRPSDTQELVQHVLSLATQDSDNPDLRDRGFIYWRL 530
Fly 531 LSTDPAA------AKEVVLADKPLISEETDLLEPTLLDELICHISSLASVYHKPPTAFVE----- 584
Fly 585 ----------------------------------------------------------------- 584
Fly 585 -----------------GRGA--------GVRKSLPNRAAGS------AAGAEQAENAAGSEAMV 618
Fly 619 IPNQESLIGDLLSMDINAPAMPSAPAATSNVDLLGGGLDILLG------GPPAEAAPGGATSLLG 677
Fly 678 DIFGLGGATLSVGVQIPKV----------TWLPAEKGKGLEIQGTFSRR--NGE---VFMDMTLT 727
Fly 728 NKAMQPMTNFAIQLNKNSFGLVPASPMQAAPLPPNQSIEVSMALGTNGPIQRMEPLNNLQVAVKN 792
Fly 793 NIDIFYFACLVHGNVLFAEDGQLDKRVFL--NTWK----EIPAANEL--QYTLSGVIGTTDGIAS 849
Fly 850 KMT-TNNIFTIAKRNVEGQDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRSVEVANII 910 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
AP-1-2beta | NP_523415.1 | Adaptin_N | 38..535 | CDD:279882 | 173/545 (32%) |
HEAT repeat | 51..75 | CDD:293787 | 13/23 (57%) | ||
HEAT repeat | 87..114 | CDD:293787 | 10/26 (38%) | ||
Cnd1 | 99..269 | CDD:289487 | 55/217 (25%) | ||
HEAT repeat | 121..151 | CDD:293787 | 12/29 (41%) | ||
HEAT repeat | 160..186 | CDD:293787 | 6/25 (24%) | ||
HEAT repeat | 197..229 | CDD:293787 | 10/31 (32%) | ||
HEAT repeat | 393..417 | CDD:293787 | 8/23 (35%) | ||
HEAT repeat | 429..458 | CDD:293787 | 14/28 (50%) | ||
HEAT repeat | 465..495 | CDD:293787 | 8/29 (28%) | ||
HEAT repeat | 506..542 | CDD:293787 | 14/41 (34%) | ||
Alpha_adaptinC2 | 703..799 | CDD:197886 | 20/100 (20%) | ||
B2-adapt-app_C | 809..919 | CDD:198088 | 24/111 (22%) | ||
Ap3b2 | NP_001101002.2 | Adaptin_N | 34..590 | CDD:366724 | 181/573 (32%) |
HEAT repeat | 111..139 | CDD:293787 | 11/27 (41%) | ||
HEAT repeat | 145..173 | CDD:293787 | 10/27 (37%) | ||
HEAT repeat | 182..208 | CDD:293787 | 7/26 (27%) | ||
AP3B1_C | 804..947 | CDD:373301 | 31/151 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D323029at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |