DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1-2beta and ap3b1

DIOPT Version :10

Sequence 1:NP_523415.1 Gene:AP-1-2beta / 32987 FlyBaseID:FBgn0010380 Length:921 Species:Drosophila melanogaster
Sequence 2:XP_012822818.3 Gene:ap3b1 / 100493180 XenbaseID:XB-GENE-987208 Length:1097 Species:Xenopus tropicalis


Alignment Length:44 Identity:11/44 - (25%)
Similarity:18/44 - (40%) Gaps:15/44 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 TLNDLLVMEAK-------------DFVSSIDFEELNLFLKFWIK 245
            |.:.||.:|.|             :|.||::..|..  :|.|.:
 Frog   158 TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQ--VKIWFQ 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1-2betaNP_523415.1 Adaptin_N 38..535 CDD:396262 11/44 (25%)
HEAT repeat 51..75 CDD:293787
HEAT repeat 87..114 CDD:293787
HEAT repeat 121..151 CDD:293787
HEAT repeat 160..186 CDD:293787
HEAT repeat 197..229 CDD:293787 6/26 (23%)
HEAT repeat 393..417 CDD:293787
HEAT repeat 429..458 CDD:293787
HEAT repeat 465..495 CDD:293787
HEAT repeat 506..542 CDD:293787
Alpha_adaptinC2 703..799 CDD:197886
B2-adapt-app_C 809..919 CDD:198088
ap3b1XP_012822818.3 Adaptin_N 59..594 CDD:396262 11/44 (25%)
HEAT repeat 129..157 CDD:293787
HEAT repeat 163..193 CDD:293787 7/29 (24%)
HEAT repeat 201..226 CDD:293787
AP3B1_C 817..961 CDD:464319
Blue background indicates that the domain is not in the aligned region.

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