DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14230 and Nol8

DIOPT Version :9

Sequence 1:NP_608349.1 Gene:CG14230 / 32984 FlyBaseID:FBgn0031062 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001258326.1 Gene:Nol8 / 70930 MGIID:1918180 Length:1165 Species:Mus musculus


Alignment Length:628 Identity:139/628 - (22%)
Similarity:255/628 - (40%) Gaps:150/628 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GH---VEHVDLKRKEQDGATKVIAFVTVQTDDAQYCVNELKWQKLHGEKLRVSLAKESFLDRLKR 89
            ||   ::|.|..|...:..:|              |||                ...|.|...:.
Mouse   595 GHHSSLKHEDHNRSLMENGSK--------------CVN----------------GSSSKLTSCQP 629

  Fly    90 EREENQRREQGEPDESEVRAPSSQLLVQSGQNKRRVFGEDEEIGDDEVAPELLITKKRAANSMH- 153
            .::.|        |.:.::.|..|...:: ||.:.:.....:.|.....|..|..|  |..|:| 
Mouse   630 AKKVN--------DPNHIQPPKRQCTFEN-QNHKVMSSTSCDKGSTNPLPGPLPLK--AKTSLHL 683

  Fly   154 -----------------NGRIVIQQEHDVKPLHVIEQHRKAAKQKP--------------DANVS 187
                             ..|..:::|.  ..|..:|...|::|..|              |:|.|
Mouse   684 SANSHKVDSDGDACHWPESRKALEKER--TNLSNLESLEKSSKVSPREDPQKSPAGFSLSDSNAS 746

  Fly   188 -------QAE--QKRKESLNKMRQGHQQKKSAIQQALSVISVEGSQAK-RIKF---SDAEEEEAS 239
                   |||  |||..:|...::..:.:|..:..||:.:.......| .|.|   :::|.||.|
Mouse   747 CINAKDKQAEDNQKRLAALAAWQKAREVQKKLVHSALANLDGHPEDKKTHIVFASDNESETEETS 811

  Fly   240 --------KPVQKAKIQKR--DLFENDDDEEEEQ-------IVLPQHKGKKGERLVEMQSKQSID 287
                    |.:.|..:.|.  .||::.|||:.:.       .:.||.:|:.|::|:::||:...|
Mouse   812 TQEQSCPEKELMKESVSKSPGKLFDSSDDEDSDSKEDSTRFSIKPQFEGRAGQKLMDLQSQFGSD 876

  Fly   288 PRFRITSNFV---NEEEEAEL-EDQPEPEE--SERKWHMNILEQVVGHAITSANDKDGKSPKN-K 345
            .|||:.|.|:   :|:|:.|| ||:...:|  :|:|..:|:::.|:...:.:..:|...:.|. |
Mouse   877 ERFRMDSRFLESDSEDEKKELNEDKVNEDELAAEKKKTLNVVQSVLNINVNNPTNKGSVAAKKFK 941

  Fly   346 KMLRFDPAKEGHQKLMRQKQPKEEEEKKEETSSTKAKTADAGNSQASAVSKTAFYIVTDTLRDSL 410
            .::.:||.|..|....|    |:|:::||..::.|.|..:|  .:...||:..:|.:...|::..
Mouse   942 DIVHYDPTKHDHAIYER----KQEDKEKESKATRKKKKEEA--EKLPEVSQDMYYNIAADLKEIF 1000

  Fly   411 NTRGEGFSLLDMFGSAPEKEVAKRQDQLEKLGHEKILVGKTSANKLGLATLNPFSYDSSDSEDET 475
            .:         |..:..::|...|.:...:.|..||...:|.|.:....|...||:..|.::||.
Mouse  1001 QS---------MSNTDEKEEDVPRTEAGAREGTGKIRNAETLACEPEQTTGFTFSFFDSATKDEK 1056

  Fly   476 E-------VK---------PKQEQEQEQELEVSKENKAQPAKKS-GQKRNKNK-LESFFIPRNDP 522
            :       ||         |:.:....:|.::::|  |..:|.| |:...:|: :..||...||.
Mouse  1057 DATYRIELVKHGKIVCPNDPRFQDSSSEEEDIAEE--ADHSKPSPGEAVPENEAIRFFFFSENDD 1119

  Fly   523 RLKEGAKFFKSTKAVVDHAEYDQVKNRLKLLITKKIAKAKKSL 565
            ||:....|:......:....::...:.|.|...||..:||:.:
Mouse  1120 RLRGSNLFWSGMGGSISRNSWEARTSSLLLECRKKHKEAKRKV 1162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14230NP_608349.1 RRM <3..>115 CDD:223796 15/89 (17%)
RRM_SF 7..77 CDD:240668 9/51 (18%)
Nol8NP_001258326.1 RRM_NOL8 27..106 CDD:240672
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843057
Domainoid 1 1.000 124 1.000 Domainoid score I5547
eggNOG 1 0.900 - - E1_KOG4365
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 156 1.000 Inparanoid score I4288
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005063
OrthoInspector 1 1.000 - - oto92464
orthoMCL 1 0.900 - - OOG6_105160
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1972
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.770

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