DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14230 and nol8

DIOPT Version :9

Sequence 1:NP_608349.1 Gene:CG14230 / 32984 FlyBaseID:FBgn0031062 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_005174031.1 Gene:nol8 / 613021 ZFINID:ZDB-GENE-050208-491 Length:1230 Species:Danio rerio


Alignment Length:657 Identity:156/657 - (23%)
Similarity:264/657 - (40%) Gaps:182/657 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ADLPTRT-SESDLQILFQDYGHVEHVDLKRKEQDGAT---KVIAFVTVQTDDAQYCVNELKWQKL 69
            |.|.|.| |||..:   :....||  |:...:...||   |.|...|:.|.:......::     
Zfish   646 AKLSTSTGSESSSE---ESESSVE--DIITSKMSSATHLVKTIPKTTINTANTSVKPKQI----- 700

  Fly    70 HGEKLRVSLAKESFLDRLKREREENQRREQG----------EPDESEVRAP--SSQLLVQSGQNK 122
               .|..|...||..::.|...||....:..          |...:.:.||  :.|....|..:.
Zfish   701 ---SLPTSTGSESSSEKSKSSVEEIITSKMSSATQFVKTTPETKTNTLNAPIKAKQASSSSSSDS 762

  Fly   123 RRVFGEDEEIGDDEVAPELLITKKRAANSMHNGRIVIQQEHDVKPLH--VIEQHRKAAKQKPDAN 185
            .   |::.|..|:|       .|.::..|..            |.||  |::    |.||:.|  
Zfish   763 S---GDELESSDEE-------EKSKSVESYS------------KVLHSTVVD----AQKQQQD-- 799

  Fly   186 VSQAEQKRKESLNKMRQGHQQKKSAIQQALS-VISVEGSQAKRIKF---SDAEEEEASKPVQKAK 246
                .|||..:|.:.::..:|:|..||.||| |.:|:.::.|.|.|   .|..:|.|::|.|...
Zfish   800 ----NQKRIAALEQRQKETEQQKKLIQGALSNVDAVKANKGKHIVFDSDEDDNDETANEPEQPTS 860

  Fly   247 IQKRDLFENDDDEEEEQI-----------------------------VLPQHKGKKGERLVEMQS 282
             ||:.|||:|...:::||                             :.||.:||.||:|:::|:
Zfish   861 -QKKSLFEDDSGSDDDQILKEKEDRAGGSKLFDSEDEDDAAEDERFQIKPQFEGKAGEKLMKLQA 924

  Fly   283 KQSIDPRFRITSNFVNEEEEAELEDQPEP-----EE--SERKWHMNILEQVVGHAITSANDKDGK 340
            :...|.||:|.|.|:..::|||.::...|     ||  .|:|..::||:.::..:|...:.|..|
Zfish   925 RFGTDSRFQIDSRFLESDDEAEDQESTTPGKDAEEELLEEKKKSLDILQSILNTSIQPQSTKKSK 989

  Fly   341 SPKNKKMLRFDPAKEGHQKLMRQKQPKEEEEKKEETSSTKAKTADAGNSQASAVSKTAFYIVTDT 405
            :.|:...|.:||.:|.|...    :.|.||.|||..::.:.|..:|  .:...|||..:|.|:..
Zfish   990 TFKDVSGLHYDPTREEHAAF----ETKIEEPKKESKAARRKKREEA--VKLPEVSKDVYYDVSVD 1048

  Fly   406 LRDSLNTRGEGFSLLDMFGSAPE-----------KEVAKRQD----------------------Q 437
            |:::             ||:|.|           ||..:.:|                      :
Zfish  1049 LKEA-------------FGAAKEDQQEKETILWDKEAEETEDGAPMEVSFTSNVETNKDSSGGFK 1100

  Fly   438 LEKLGHEKILVGKTSANKLGLATLNP----------FSYDSSDSEDETEVKPKQEQEQEQELEVS 492
            ....|.:.::...|..::..:.|:..          |...|||.|...||    :::|...:.|.
Zfish  1101 FSFFGDDTVVENSTKTDEYKIETIKAAKFSWQVDPRFQDSSSDEEGVDEV----DEDQSASVNVQ 1161

  Fly   493 KENKAQPAKKSGQKRNKNKLESFFIPRNDPRLKEGAKFFKSTKAVVDHAE-YDQVKNRLKLLITK 556
            :|: ..|:||:          .||..::|.|||||...|..:..:.|..| :::.:..|:....|
Zfish  1162 EES-PMPSKKA----------FFFFHKDDERLKEGPGMFCRSGNLKDQREAWEEKRTSLREECRK 1215

  Fly   557 KIAKAKK 563
            |...|::
Zfish  1216 KHRDARR 1222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14230NP_608349.1 RRM <3..>115 CDD:223796 27/121 (22%)
RRM_SF 7..77 CDD:240668 17/71 (24%)
nol8XP_005174031.1 RRM_NOL8 3..82 CDD:240672
Hex_IIIa <1117..1227 CDD:280593 29/121 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587953
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005063
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105160
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1972
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.820

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