DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14230 and Nol8

DIOPT Version :9

Sequence 1:NP_608349.1 Gene:CG14230 / 32984 FlyBaseID:FBgn0031062 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_006253748.1 Gene:Nol8 / 361221 RGDID:1309551 Length:1159 Species:Rattus norvegicus


Alignment Length:439 Identity:101/439 - (23%)
Similarity:193/439 - (43%) Gaps:70/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 AKQKPDANVSQAEQKRKESLNKMRQGHQQKKSAIQQALSVISVEGSQAKR---IKF-SDAEEE-- 236
            ||.|.    ::..|||..:|...:...:.:|..:..||:  :::|....|   |.| ||.|.|  
  Rat   743 AKDKH----AEDNQKRLAALAAWQNAREVQKKLVHSALA--NLDGRPENRKTHIVFASDNESETE 801

  Fly   237 -----EASKP----VQKAKIQKRD--LFENDDDEEEEQ-------IVLPQHKGKKGERLVEMQSK 283
                 |.|.|    |::..::|..  ||::.||||.:.       .:.||.:|:.|::|:::||.
  Rat   802 ETSTHEQSCPEKELVKQESVRKASGKLFDSSDDEESDSKEDSTRFSIKPQFEGRAGQKLMDLQSH 866

  Fly   284 QSIDPRFRITSNFV---NEEEEAELEDQPEPEE---SERKWHMNILEQVVGHAITSANDKDGKSP 342
            ...|.|||:.|.|:   :|:|:.||.:....|:   :|:|..:::::.|:..::.:...|...:.
  Rat   867 FGSDERFRMDSRFLESDSEDEQKELNENTVDEDELAAEKKKTLSVVQSVLNISVNNPTSKGSVAA 931

  Fly   343 KN-KKMLRFDPAKEGHQKLMRQKQPKEEEEKKEETSSTKAKTADAGNSQASAVSKTAFYIVTDTL 406
            |. |.::.:||.|..|....|    |:|:::||..:..|.|..:|  .:...||:..:|.:...|
  Rat   932 KKFKDIVHYDPTKHDHAIYER----KQEDKEKESKAKRKKKKEEA--EKLPEVSQDMYYNIATDL 990

  Fly   407 RDSLNTRGEGFSLLDMFGSAPEKEVAKRQDQLEKLGHEKILVGKT----SANKLGLATLNPFSYD 467
            ::...:         |..:..::|...|.:...:.|..:|...:|    |....|. |.:.|...
  Rat   991 KEIFQS---------MKNTDEKEEDTSRNEAYAREGAGEIRNAETLTCGSEQTAGF-TFSFFDSA 1045

  Fly   468 SSDSEDET-------------EVKPKQEQEQEQELEVSKENKAQPAKKSGQKRNKNKLESFFIPR 519
            :.|.:|:|             :..|:.:....:|.:|::|...:..........|..:..||...
  Rat  1046 TKDVKDDTYRVEPVRRGKTVCQNDPRFQDSSSEEEDVTEEADHRKTSLGEAVPEKETIRFFFFSE 1110

  Fly   520 NDPRLKEGAKFFKSTKAVVDHAEYDQVKNRLKLLITKKIAKAKKSLPSK 568
            ||.||:....|:......:..:.::...:.|.|...||..:||:.:.:|
  Rat  1111 NDDRLRGSDLFWSGAGGGISRSSWEARTSSLLLDCRKKHKEAKRKVKTK 1159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14230NP_608349.1 RRM <3..>115 CDD:223796
RRM_SF 7..77 CDD:240668
Nol8XP_006253748.1 RRM <26..>151 CDD:223796
RRM_NOL8 33..112 CDD:240672
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346561
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 156 1.000 Inparanoid score I4203
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005063
OrthoInspector 1 1.000 - - oto96029
orthoMCL 1 0.900 - - OOG6_105160
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.880

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