DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14230 and SPBP16F5.06

DIOPT Version :9

Sequence 1:NP_608349.1 Gene:CG14230 / 32984 FlyBaseID:FBgn0031062 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_595780.1 Gene:SPBP16F5.06 / 2541269 PomBaseID:SPBP16F5.06 Length:478 Species:Schizosaccharomyces pombe


Alignment Length:556 Identity:114/556 - (20%)
Similarity:208/556 - (37%) Gaps:136/556 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RFFLADLPTRTSESDLQILFQDYGHVEHVDLKRKEQD-GATKVIAFVTVQTDDAQYCVNELKWQK 68
            |.::..|.:....|||:..|..:|.|.::::..|... |..:..|::..:||       |.||||
pombe     6 RIYVGGLSSSIESSDLESRFSRFGSVSNLEIINKSTPVGTIQRFAYLNFRTD-------EDKWQK 63

  Fly    69 ---------LHGEKLRVSLAKESFLDRLKREREENQRREQGEPDESEVRAPSSQLLVQSGQNKRR 124
                     ..|.|||:..|:..:|.:|::|::...                    :||..|   
pombe    64 CKSYLSNATFKGSKLRIEEARPYYLVKLQQEKKIAD--------------------LQSTNN--- 105

  Fly   125 VFGEDEEIGDDEVAPELLITKKRAANSMHNGRIVIQQEHDVKPLHVIEQHRKAAKQKPDANVSQA 189
                ||:..|..       :|....:.:.:|.|::..:|. |.:.|:          .|::|   
pombe   106 ----DEKNEDHS-------SKVDLEDPVFHGEIIVPGKHS-KNMQVV----------TDSDV--- 145

  Fly   190 EQKRKESLNKMRQGHQQKKSAIQQALSVISVEGSQAKRIKFSDAEEEEASKPVQKAKIQK----- 249
               ||:   ..|:|  .||....:|:.|:.:.....|:.:|        ..|:.|..:||     
pombe   146 ---RKD---PPRKG--WKKGPYGRAIVVLRMYNKNTKKTRF--------FYPLGKNCLQKLWGRV 194

  Fly   250 -------RDLFENDDDEEEEQIVLPQHKGKKGER-LVEMQSK-------QSIDPRFRITSNFVNE 299
                   ...:::|.||      ...:.||:..| .:.||:|       |..|..|.:.:|...|
pombe   195 ETNMDNTTAFYDSDHDE------YVSYGGKRASRDKIRMQAKLGIKASTQKDDNDFELLNNTTGE 253

  Fly   300 -EEEAELEDQPEPEESERKWHMNILEQVVGHAITSANDKD-GKSPKNKKMLRFDPAKEGHQKLMR 362
             |...||.:  |..::.||...:....|:.....|.|.:: ....|...:|..|  .:......:
pombe   254 IEVTKELNE--EQLDALRKKDKDTAASVLAELFGSENTEEIDTVSKTSGVLELD--NDSTNNFQK 314

  Fly   363 QKQPKEEEEKKEETSSTKAKTADAGNSQASAVSKTAFYIVTDTLRDSLNTRGEGFSLLDMFG--- 424
            :...:::..:|||:.............:.:||      :..|.|::..::..:..|...:||   
pombe   315 EGLDEQDNLQKEESVHIDVPAEFEAFDERTAV------VNVDNLKEMFSSNAQDTSKFSLFGNEN 373

  Fly   425 -----SAPEKEVAKRQDQL---EKLGHEKILVGKTSANKLG---LATL-NPFSYDSSDSEDETEV 477
                 |..|.|:..|..:.   |..|...:.:.|.|:...|   :.|| ||.|.....:||.|..
pombe   374 GVGEESEMESEIDDRNYETMEEEADGETPLAIVKASSGTKGWPKMFTLPNPSSLFQPGNEDYTSR 438

  Fly   478 KPKQEQEQEQELEVSKENKAQPAKKSGQKRNKNKLE 513
            :..:....|..|.::::.|.:  :|...||.:...|
pombe   439 EALESWWSENRLFLTRDYKRK--RKDAVKRQRRAHE 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14230NP_608349.1 RRM <3..>115 CDD:223796 26/119 (22%)
RRM_SF 7..77 CDD:240668 21/79 (27%)
SPBP16F5.06NP_595780.1 RRM_NOL8 6..84 CDD:240672 22/84 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005063
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105160
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1972
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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