DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14230 and nol8

DIOPT Version :9

Sequence 1:NP_608349.1 Gene:CG14230 / 32984 FlyBaseID:FBgn0031062 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001107347.2 Gene:nol8 / 100135171 XenbaseID:XB-GENE-6258524 Length:1202 Species:Xenopus tropicalis


Alignment Length:694 Identity:168/694 - (24%)
Similarity:281/694 - (40%) Gaps:192/694 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SESDLQILFQDYGHV-----------------------EHVDLK------RKEQDGAT--KVIAF 49
            ||||.:  .||..|:                       :|..:|      ||::.|.|  :::|.
 Frog   559 SESDSE--NQDLAHLASTAKETSEDETVEKEAGSSTTNQHEYVKTPTATQRKKKTGTTPDEIVAS 621

  Fly    50 VTVQTDDAQYCVNELKWQK--------------LHG----EKLRVSL-AKESFL-------DRLK 88
            : ::.||.:.|..:.|.:|              |.|    ::|..|| :|.:||       |...
 Frog   622 L-LEDDDDKNCDEQRKRKKGSPVKLPAFKGLGSLLGTACKQELDASLNSKSNFLPSTSSAIDVKS 685

  Fly    89 REREENQRREQGEPDESEVRAPSSQLLVQSGQNK---RRVFGEDEEIGDDEVA---PELLITKKR 147
            ...:..|::...|....::..|:.:|......||   |:......:...||.|   |..:|....
 Frog   686 STSDTEQKKAAVEESVLDLNYPTQKLSKSQKNNKVELRQSCSSSSDSSSDESATSSPSPVIPASG 750

  Fly   148 AANSMHNGRIVIQQEHDVKPLHVIEQHRKAAKQ-KPDANVS-----QAEQKRKESLNKMRQGHQQ 206
                                 |.:.|..|:::| .|.|..|     |..:||..::.:.|:..:|
 Frog   751 ---------------------HTMAQKNKSSEQVNPSAQNSVALKLQDNEKRLAAMEERRKEREQ 794

  Fly   207 KKSAIQQALSVISVEGS-QAKRIKF-SDAEEEE----------ASKPVQKAKIQKRDLFENDDDE 259
            :|.||:.||..:..:.| :.|.|.| |:||.||          .|||.:|.:.:...|||:.|||
 Frog   795 QKQAIKGALLKLDSQPSLKGKHIVFDSEAESEEDDSVALSTDAMSKPTEKEQSKTAKLFESSDDE 859

  Fly   260 EEE------------QIVLPQHKGKKGERLVEMQSKQSIDPRFRITSNFV--NEEEEAELEDQPE 310
            .:|            || ..|::|:.||:|:::||:...|.||::.|.|:  |.|:|.|.|:..:
 Frog   860 SDEGDDKGSDDAARFQI-KSQYEGRSGEKLMQLQSRFGTDDRFKMDSRFLDSNSEDEEEEENSQK 923

  Fly   311 PE--------ESERKWHMNILEQV----VGHAITSANDKDGKSPKNKKMLRFDPAKEGHQKLMRQ 363
            .:        .:|:|.::.||:.:    |.:...|......|..|:...|::||.||.|   :..
 Frog   924 AQADKGGDELSAEKKKNLAILQSLLNINVENPPVSKQASKAKKFKDLNALQYDPTKEDH---VAF 985

  Fly   364 KQPKEEEEKKEETSSTKAKTADAGNSQASAVSKTAFYIVTDTLRDSLNTRGEGFSLLDMFG-SAP 427
            :...|||||||..|..|.|..:|  .:...||...::.|             .....::|| |.|
 Frog   986 EAKSEEEEKKESKSQRKKKRLEA--EKLPEVSAETYHEV-------------AIDFKEVFGASKP 1035

  Fly   428 EKEVAKRQDQLEKL-GHEKILVGKTSANKLGLATLNP-------FSYDSSDSEDETEVKPK---- 480
            :.......||.|:: |.||    ::||.....:.|:.       |::...|:.:|:.:|.:    
 Frog  1036 DPASGTTWDQEEEMEGPEK----ESSAKPQHFSFLSEDKEEPSGFTFSFFDAANESAIKEETYKI 1096

  Fly   481 --------------------QEQEQEQELEVSKENKAQPAKKSGQKRNKNKLESFFIPRNDPRLK 525
                                .|.|.:.|....||:|.    .|..|..|:.:..||..::|.|||
 Frog  1097 ETIKPAKVAWQEDPRFQDSSSEGEDDDEPTTEKESKI----SSETKTLKSTVRFFFFVKDDKRLK 1157

  Fly   526 EGAK-FFKSTKAVVDHAEYDQVKNRLKLLITKKIAKAKKSLPSK 568
            ||.| ||:|:........::|.::.|.....|:...||:.:.:|
 Frog  1158 EGPKMFFQSSNLAEMEEAWEQRRDFLLEECKKRHKDAKRKVKAK 1201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14230NP_608349.1 RRM <3..>115 CDD:223796 31/155 (20%)
RRM_SF 7..77 CDD:240668 22/109 (20%)
nol8NP_001107347.2 RRM_NOL8 7..86 CDD:240672
MSCRAMM_SdrC <235..527 CDD:380146
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005063
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1972
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.030

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