DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14232 and Tmed8

DIOPT Version :9

Sequence 1:NP_001245766.1 Gene:CG14232 / 32983 FlyBaseID:FBgn0031061 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_038969264.1 Gene:Tmed8 / 681943 RGDID:1589336 Length:326 Species:Rattus norvegicus


Alignment Length:433 Identity:126/433 - (29%)
Similarity:180/433 - (41%) Gaps:133/433 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QAALGPFNTSRAPALGVLDVIGRDRQQHWQLLGEITREQAMEGFVDLLDT--------------M 116
            |||.||...|.|...|....:| ||:      |....:.|.....||..|              .
  Rat     5 QAAEGPAFWSPAARRGSAGGVG-DRR------GVEESQAAASEKEDLESTKVNSPLASAPDPAAQ 62

  Fly   117 CSAFRP-YIEAVRQDRDETLRKELRLMEEKKEARERQENAQQELLEEGYKEELQRRQLQDALNKQ 180
            .|.:|| .:..|.:|..|.|:|       ...|.|.|...:|..|..|..:.|..          
  Rat    63 SSPYRPQMVSPVSKDTTEDLQK-------AAGASEAQAPGEQASLPAGQTQVLSE---------- 110

  Fly   181 TYQQFKLYAEKQFPGNPEQQAVLIHQLQREHYHQYMQQLHLQNQNQNQNQNTEDKGHQEAEHVPG 245
                   .|:.|.|..||...:    :|.||                                .|
  Rat   111 -------MAKYQAPQRPEDTVM----IQSEH--------------------------------TG 132

  Fly   246 NNNNSSTDLPNAMEGLKLGEVETQQHQQLAEQQDGHVEQTLEGVGQEQHGEEEYDDYVMICPAKI 310
            ..:..|.||.:|.   .||:     |::::..                          ::.|..:
  Rat   133 AIDVLSADLESAD---LLGD-----HRKVSPP--------------------------LMAPPCV 163

  Fly   311 WTRPDIEQFKTEVSAGDGDGVITIGHGDTVTVRVPTNMNGKCIFWEFATDSYDIGFGIYFEWAKP 375
            ||...:::||:::.. :.:..:.:..|:.||:||||:..||.:.||||||.||||||:||:|...
  Rat   164 WTFAKVKEFKSKLGK-EKNSRLVVKRGEVVTIRVPTHPEGKRVCWEFATDDYDIGFGVYFDWTPV 227

  Fly   376 VTNEVTVHVSDSDEDEDCVDEDYLSTTE-----DLESGSLSQERGAVNNPTAAPKAPISIIVPIY 435
            .:.::||.||||.||||..:|:.....|     |:|.||.|..||....           ::|:|
  Rat   228 TSTDITVQVSDSSEDEDEEEEEEEEIEEPVPVGDVERGSRSSLRGRYGE-----------VMPVY 281

  Fly   436 RRECYNEVYVGSHSYPGEGVYLLKFDNSYSIWRNKTLYYRVYY 478
            ||:.:.:|..|||.|||||:||||||||||:.||||||:.:||
  Rat   282 RRDSHRDVQAGSHDYPGEGIYLLKFDNSYSLLRNKTLYFHIYY 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14232NP_001245766.1 ACBP 33..117 CDD:279259 16/64 (25%)
GOLD_2 334..478 CDD:290608 72/148 (49%)
Tmed8XP_038969264.1 GOLD_2 186..325 CDD:404736 74/150 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 164 1.000 Domainoid score I3848
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D321733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto96605
orthoMCL 1 0.900 - - OOG6_105136
Panther 1 1.100 - - O PTHR22973
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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