DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and RHO5

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_014219.1 Gene:RHO5 / 855541 SGDID:S000005124 Length:331 Species:Saccharomyces cerevisiae


Alignment Length:227 Identity:104/227 - (45%)
Similarity:140/227 - (61%) Gaps:42/227 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI------------------- 46
            |::||||::||||||||.||||||||.||::|||||||||:.|:.|                   
Yeast     1 MRSIKCVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRG 65

  Fly    47 -----GGEP------YTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE 100
                 ...|      |.:.|:||||||||||||||.|||||:||:||||...:||.||.|||:||
Yeast    66 SLSSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPE 130

  Fly   101 I--THHCQ---------KTPFLLVGTQIDLRDENSTLEKLAKNKQKPITMEQGEKLAKELKAVKY 154
            :  |.:.:         |.|.|||||:.||||:.:|.:||.:.....::.|:.::|.:....:.|
Yeast   131 LKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGY 195

  Fly   155 VECSALTQKGLKNVFDEAILAAL-EPPEPTKK 185
            .||||.||.|::.||::|:..|: ||..|.:|
Yeast   196 TECSAATQAGVREVFEQAVRYAIYEPESPNQK 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 98/214 (46%)
RHO5NP_014219.1 RHO 6..220 CDD:197554 97/213 (46%)

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