DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and RHO3

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_012148.1 Gene:RHO3 / 854688 SGDID:S000001380 Length:231 Species:Saccharomyces cerevisiae


Alignment Length:199 Identity:81/199 - (40%)
Similarity:109/199 - (54%) Gaps:31/199 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69
            |.|::||||.|||.||..:|...||..|.||||:||...:.:..:..||.|:||||||::||||.
Yeast    18 KIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRS 82

  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDE------------ 122
            |||..|...::|||:.|..|.|||:.|||.|||.||:....:||..:.|||:.            
Yeast    83 LSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNI 147

  Fly   123 --------------NSTLEKLAKNKQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 173
                          |||     .|.:..|:.|:|..:||::.|::|:||||...||:...|.||.
Yeast   148 QQDNSVSNDNGNNINST-----SNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAFTEAA 207

  Fly   174 LAAL 177
            ..||
Yeast   208 RVAL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 79/197 (40%)
RHO3NP_012148.1 Rho3 17..231 CDD:206706 81/199 (41%)

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