DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and ROP2

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_173437.1 Gene:ROP2 / 838598 AraportID:AT1G20090 Length:195 Species:Arabidopsis thaliana


Alignment Length:200 Identity:104/200 - (52%)
Similarity:139/200 - (69%) Gaps:22/200 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            ||||.||||||||||:|||||:|.||::||||||||::..|::.|....|||:||||||||:|||
plant     6 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLR 70

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ||||...|||::.||::|.:|:||:.:||:||:.|:....|.:||||::||||:          |
plant    71 PLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDD----------K 125

  Fly   134 Q--------KPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRK--- 187
            |        .|||..|||:|.|.:.:..|:|||:.||:.:|.|||.||...|:||:..||:|   
plant   126 QFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKKNKN 190

  Fly   188 -CKFL 191
             |.||
plant   191 RCAFL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 95/180 (53%)
ROP2NP_173437.1 Rop_like 5..177 CDD:206705 95/180 (53%)

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