DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc42 and ROP9

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_194624.1 Gene:ROP9 / 829016 AraportID:AT4G28950 Length:209 Species:Arabidopsis thaliana


Alignment Length:187 Identity:98/187 - (52%)
Similarity:133/187 - (71%) Gaps:7/187 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            ||||.||||||||||:||.||:||||::|:||||||::..|.:.|:...|||:||||||||.|||
plant     7 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDYSRLR 71

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ||||...|:|::.||::|.:|:|||.:||:||:.......|.:||||::||||:...|    .:.
plant    72 PLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKGYL----ADH 132

  Fly   134 QKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPP---EPTKKRK 187
            ...||..|||:|.|::.|..|:|||:.||:.:|.|||.||...|:||   |..::||
plant   133 TNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEVPRRRK 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 92/172 (53%)
ROP9NP_194624.1 Rop_like 6..176 CDD:206705 92/172 (53%)

Return to query results.
Submit another query.