DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and ROP1

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_190698.1 Gene:ROP1 / 824293 AraportID:AT3G51300 Length:197 Species:Arabidopsis thaliana


Alignment Length:201 Identity:104/201 - (51%)
Similarity:138/201 - (68%) Gaps:23/201 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            :|||.||||||||||||||||:|.||::||||||||::..|::.|....|||:||||||||:|||
plant     7 VKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLR 71

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ||||...|||::.||::|.:|:|||.:||:||:.|:....|.:||||::||||:          |
plant    72 PLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDD----------K 126

  Fly   134 Q--------KPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRK--- 187
            |        .|||..|||:|.|::.|..|:|||:.||:.:|.|||.||...|:||:..||:.   
plant   127 QFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQ 191

  Fly   188 --CKFL 191
              |..|
plant   192 KACSIL 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 97/180 (54%)
ROP1NP_190698.1 Rop_like 6..178 CDD:206705 97/180 (54%)

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