DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and AT3G51290

DIOPT Version :9

Sequence 1:NP_001245762.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001190052.1 Gene:AT3G51290 / 824292 AraportID:AT3G51290 Length:798 Species:Arabidopsis thaliana


Alignment Length:174 Identity:82/174 - (47%)
Similarity:113/174 - (64%) Gaps:23/174 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 95
            :||||||||::..|::.|....|||:||||||||:|||||||...|||::.||::|.:|:|||.:
plant   635 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSK 699

  Fly    96 KWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ--------KPITMEQGEKLAKELKAV 152
            ||:||:.|:....|.:||||::||||:          ||        .|||..|||:|.|::.|.
plant   700 KWIPELKHYAPGVPIVLVGTKLDLRDD----------KQFFIDHPGAVPITTAQGEELRKQIGAP 754

  Fly   153 KYVECSALTQKGLKNVFDEAILAALEPPEPTKKRK-----CKFL 191
            .|:|||:.||:.:|.|||.||...|:||:..||:.     |..|
plant   755 TYIECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_001245762.1 Cdc42 3..177 CDD:206664 75/153 (49%)
RHO 6..179 CDD:197554 76/155 (49%)
AT3G51290NP_001190052.1 DUF630 1..59 CDD:282617
DUF632 203..509 CDD:282616
RAS 608..778 CDD:214541 75/152 (49%)
Rop_like 635..779 CDD:206705 75/153 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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