DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc42 and ARAC9

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_566024.1 Gene:ARAC9 / 819077 AraportID:AT2G44690 Length:209 Species:Arabidopsis thaliana


Alignment Length:194 Identity:107/194 - (55%)
Similarity:134/194 - (69%) Gaps:18/194 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            ||||.||||||||||||||||:|.||::||||||||:...|::.|:...|||:||||||||:|:|
plant    19 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQEDYNRVR 83

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ||||...|||::.||::|..||||:.:|||||:.|:....|.:||||:.||||          |.
plant    84 PLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRD----------NM 138

  Fly   134 QKP--------ITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKCK 189
            |.|        |..|||::|.||:.|:.|:|||:..|..:|.||||||...|.||..|||||.|
plant   139 QFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVLHPPSKTKKRKRK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 98/180 (54%)
ARAC9NP_566024.1 Rop_like 18..190 CDD:206705 98/180 (54%)

Return to query results.
Submit another query.