DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and Rnd3

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_083086.1 Gene:Rnd3 / 74194 MGIID:1921444 Length:244 Species:Mus musculus


Alignment Length:188 Identity:79/188 - (42%)
Similarity:115/188 - (61%) Gaps:3/188 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QTIKC--VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64
            |.:||  |||||...|||.||..:..:.||..||||||:||..:..|..:...|.|:||:|...|
Mouse    20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 84

  Fly    65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKL 129
            |.:||||||.:|..|:||.:..|.:.::|.:||..||...|..|..||||.:.|||.:.|||.:|
Mouse    85 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVEL 149

  Fly   130 AKNKQKPITMEQGEKLAKELKAVKYVECSAL-TQKGLKNVFDEAILAALEPPEPTKKR 186
            :.::|.|::.:||..:||::.|..|:||||| ::..::::|..|.||.:.......||
Mouse   150 SNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKR 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 76/176 (43%)
Rnd3NP_083086.1 Rnd3_RhoE_Rho8 19..200 CDD:206735 77/179 (43%)
Effector region. /evidence=ECO:0000255 52..60 6/7 (86%)

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