DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and Rhobtb1

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001074816.1 Gene:Rhobtb1 / 69288 MGIID:1916538 Length:695 Species:Mus musculus


Alignment Length:202 Identity:79/202 - (39%)
Similarity:116/202 - (57%) Gaps:30/202 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEY------VPTVF--DNYAVTV--------MIGGE 49
            ::|||||||||.|||||.|:.:...|...::|      ||||:  |.|.|..        ::...
Mouse    12 VETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEV 76

  Fly    50 PYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 114
            ..:|.|:||.|  |:.:.|..:|.::||.::|||:.:|:|..:||..|..||.|.|.:||.:|||
Mouse    77 SISLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKTMWYQEIKHFCPRTPVVLVG 139

  Fly   115 TQIDLRDENSTLEKLAKNKQ---KPITM------EQGEKLAKELKAVKYVECSALTQKGLKNVFD 170
            .|:|||  .:.||.:.:.::   :||..      |:|.::|||| .:.|.|.|...|.|:|:|||
Mouse   140 CQLDLR--YADLEAVNRARRPLARPIKRGDILPPEKGREVAKEL-GIPYYETSVFDQFGIKDVFD 201

  Fly   171 EAILAAL 177
            .||.|||
Mouse   202 NAIRAAL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 77/198 (39%)
Rhobtb1NP_001074816.1 Rho-like 1..210 79/202 (39%)
RhoBTB 13..207 CDD:133275 76/198 (38%)
BTB_POZ 248..459 CDD:453885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..351
BTB_POZ 464..589 CDD:453885
BACK_RHOBTB1 592..691 CDD:350605
Blue background indicates that the domain is not in the aligned region.

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