DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc42 and rhobtb3

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_691270.6 Gene:rhobtb3 / 562804 ZFINID:ZDB-GENE-091204-190 Length:619 Species:Danio rerio


Alignment Length:181 Identity:40/181 - (22%)
Similarity:73/181 - (40%) Gaps:25/181 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SYTTNKFP-----SEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVC 81
            |.|.::.|     .||...|..:  |.||:...| :..:.|:    |:..:|.: ..|.|:.::.
Zfish    48 SMTPSRHPLNPAFMEYQSRVMGD--VRVMVRDCP-SWDILDS----DWVSVRSI-LEQADIVVIK 104

  Fly    82 FSVVSPSSFENVKEKWVPEITHHCQK--TPFLLVGTQIDLRDEN--STLEKLAKNKQKPITMEQG 142
            :||....:|:.|:..:.|.:....:.  .|.:||.....|.||.  .|....|.:....:...:|
Zfish   105 YSVNDKLAFQQVRNGYAPRLRPLLRHWGVPVILVAVGARLNDEGPPCTCPLCASDWSSCVPHSEG 169

  Fly   143 EKLAKELKAVKYVECSALTQKGLKNVFDEAI-------LAALEPPEPTKKR 186
            .:|:::|.|. |:|..:|....:...|...:       |.......|.|:|
Zfish   170 LQLSRDLGAT-YLELPSLNNFFVGRYFGSVLEYFMIQCLKQKAKERPDKRR 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 37/170 (22%)
rhobtb3XP_691270.6 P-loop containing Nucleoside Triphosphate Hydrolases <80..195 CDD:476819 25/120 (21%)
BTB_POZ 244..406 CDD:453885
BTB2_POZ_RHOBTB3 417..526 CDD:349669
BACK_RHOBTB3 536..619 CDD:350607
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.