DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and cdc42l2

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_021325488.1 Gene:cdc42l2 / 556226 ZFINID:ZDB-GENE-060312-21 Length:204 Species:Danio rerio


Alignment Length:188 Identity:142/188 - (75%)
Similarity:157/188 - (83%) Gaps:6/188 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65
            |.|||||||||.||||||||:|: |||||||  ||||:..:||||:||||||:.||:.|||   |
Zfish    20 MSTIKCVVVGDEAVGKTCLLVSF-TNKFPSE--PTVFNTQSVTVMMGGEPYTIRLFNAAGQ---D 78

  Fly    66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLA 130
            :||||:|||||||||||||||.|||||||||||||||.:..|||||||||||||||:..|:.:||
Zfish    79 QLRPLNYPQTDVFLVCFSVVSLSSFENVKEKWVPEITFYAPKTPFLLVGTQIDLRDDPVTVARLA 143

  Fly   131 KNKQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKC 188
            |||||||..|..||||:||||||||||||||.|||||||||||||||:|.......||
Zfish   144 KNKQKPIKPEAAEKLARELKAVKYVECSALTLKGLKNVFDEAILAALQPSGSQNTCKC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 136/173 (79%)
cdc42l2XP_021325488.1 P-loop containing Nucleoside Triphosphate Hydrolases 22..190 CDD:476819 136/173 (79%)

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