Protein Alignment Cdc42 and si:ch211-133l11.10

DIOPT Version :9

• Sequence 1: NP_001245762.1
• Gene: Cdc42 / 32981
• FlyBaseID: FBgn0010341
• Length: 191
• Species: Drosophila melanogaster
• Sequence 2: XP_005160216.1
• Gene: si:ch211-133l11.10 / 555552
• ZFINID: ZDB-GENE-141219-14
• Length: 262
• Species: Danio rerio
• Alignment Length: 188
• Identity: 96/188 - (51%)
• Similarity: 128/188 - (68%)
• Gaps: 10/188 - (5%)

  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ------- 61
            :|||:|||||||||.|:||||||.:|:|::||.|||:...|::.|.|..|.|.|.|||
Zfish    37 VKCVMVGDGAVGKTSLIISYTTNGYPAEHIPTAFDNFTARVVVDGRPVQLQLCDMAGQRWEAVDQ 101

  Fly    62 ---EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDEN 123
               :|:||||||.|...||||:|:|||.||||.:|.::|.|||...|...|.:|||||.||.::.
Zfish   102 SLNDDFDRLRPLCYRDADVFLLCYSVVLPSSFRSVTDRWAPEINRICPGVPIILVGTQCDLLEDV 166

  Fly   124 STLEKLAKNKQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181
            ..|.:||:.::||::.|.....|:.:.||.:.||||||||.||.|||.||||:::..|
Zfish   167 QVLIRLAEGQEKPVSQEDARLCARSIGAVTFAECSALTQKNLKEVFDAAILASMKHAE 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cdc42	NP_001245762.1	Cdc42	3..177	CDD:206664	95/182 (52%)
		RHO	6..179	CDD:197554	94/182 (52%)
si:ch211-133l11.10	XP_005160216.1	Wrch_1	37..219	CDD:133330	94/181 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1091615at2759
OrthoFinder	1	1.000	-	-		FOG0000070
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920