DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc42 and rhoub

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001017784.2 Gene:rhoub / 550481 ZFINID:ZDB-GENE-050417-308 Length:237 Species:Danio rerio


Alignment Length:186 Identity:97/186 - (52%)
Similarity:132/186 - (70%) Gaps:0/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            :|||.:||||||||.|::|||||.:|::||||.||:::..|.:.|:|..|.|.|||||:::|:||
Zfish    29 LKCVFLGDGAVGKTSLIVSYTTNGYPTKYVPTAFDDFSAVVQVDGQPVRLQLCDTAGQDEFDKLR 93

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ...|.:|||.|:|||||||:||:|:.|||||||...|..||.:|||||.|||.:...|..||:.:
Zfish    94 HFCYTRTDVLLLCFSVVSPASFQNIGEKWVPEIRRRCPLTPVILVGTQCDLRQDVKVLIDLARRR 158

  Fly   134 QKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKCK 189
            ::|:..|....||.::.||.|:|||:||||.||.|||.||...|...:...:|:.|
Zfish   159 ERPVLEEDARALADKIGAVSYIECSSLTQKNLKEVFDAAISVGLRHSDRRARRERK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 94/172 (55%)
rhoubNP_001017784.2 Wrch_1 29..198 CDD:133330 92/168 (55%)

Return to query results.
Submit another query.