DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rhoc

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001016569.1 Gene:rhoc / 549323 XenbaseID:XB-GENE-941426 Length:193 Species:Xenopus tropicalis


Alignment Length:187 Identity:97/187 - (51%)
Similarity:130/187 - (69%) Gaps:0/187 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69
            |.|:|||||.|||||||.::.::||..||||||:||...:.:.|:...|.|:|||||||||||||
 Frog     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRP 71

  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ 134
            ||||.|||.|:|||:.||.|.||:.|||.||:.|.|...|.:|||.:.|||::..|..:|.|.||
 Frog    72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQ 136

  Fly   135 KPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKCKFL 191
            :|:..|.|.::|..:.|..|:||||.|:.|::.||:.|..|||:..:..||::|..|
 Frog   137 EPVKPEDGREMANRINAFGYLECSAKTKDGVREVFEMATRAALQVRKHRKKQRCSIL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 91/171 (53%)
rhocNP_001016569.1 RhoA_like 5..179 CDD:206662 91/171 (53%)

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