DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rhof

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001016369.1 Gene:rhof / 549123 XenbaseID:XB-GENE-920536 Length:218 Species:Xenopus tropicalis


Alignment Length:193 Identity:88/193 - (45%)
Similarity:122/193 - (63%) Gaps:5/193 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            :|.|:||||..|||.||:.|....||.:|.|:||:.|..|:.||.:...|.|:||||||||||||
 Frog    26 VKIVIVGDGGCGKTSLLMVYAKGSFPEQYAPSVFEKYTTTITIGNKDIFLHLYDTAGQEDYDRLR 90

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ||||...::.|:|:.|.:|:||:||..||.||:.|.|:..|.:|:|.:.|||.:...|.||...:
 Frog    91 PLSYQDVNLVLICYDVTNPTSFDNVLIKWYPEVHHFCRGVPIVLIGCKTDLRKDKERLRKLRTAQ 155

  Fly   134 QKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL-----EPPEPTKKRKCKFL 191
            |:|:|..|||...|.::|.:|:||||..::.:.|||.||.|.||     |.....|::.|..|
 Frog   156 QEPVTYFQGEDTCKSIQAAEYLECSAKYRENIDNVFKEATLIALNAMKREQKLKRKQKNCSLL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 82/172 (48%)
rhofNP_001016369.1 Rho4_like 23..218 CDD:206704 87/191 (46%)

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