DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rhoua

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001007444.1 Gene:rhoua / 492802 ZFINID:ZDB-GENE-040618-3 Length:254 Species:Danio rerio


Alignment Length:186 Identity:106/186 - (56%)
Similarity:144/186 - (77%) Gaps:0/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            :|||:|||||||||.|::|||||.:|:|||||.|||:|..|.:.|:|..|.|.|||||:::|:||
Zfish    47 VKCVLVGDGAVGKTSLIVSYTTNGYPTEYVPTAFDNFAAVVAVDGKPVKLQLCDTAGQDEFDKLR 111

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ||.|...||||:||||||||||:||:|||||||..||.:.|.||||||.|||::...|.:||:.|
Zfish   112 PLCYTNADVFLLCFSVVSPSSFQNVREKWVPEIRRHCPRAPILLVGTQSDLREDVKVLIQLAQYK 176

  Fly   134 QKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKCK 189
            ::|:..:.....|:|::||.|:||||||||.||.|||.||:|:::..:..::::.|
Zfish   177 ERPVEPQDASVCAEEVQAVSYMECSALTQKNLKEVFDTAIVASIQYSDSQQQKRLK 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 105/172 (61%)
rhouaNP_001007444.1 Wrch_1 47..219 CDD:133330 104/171 (61%)

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