DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rhob

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001001214.1 Gene:rhob / 407883 XenbaseID:XB-GENE-478301 Length:196 Species:Xenopus tropicalis


Alignment Length:195 Identity:98/195 - (50%)
Similarity:128/195 - (65%) Gaps:13/195 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69
            |.|||||||.|||||||.::.::||..||||||:||...:.:..:...|.|:|||||||||||||
 Frog     7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDVKQVELALWDTAGQEDYDRLRP 71

  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ 134
            ||||.|||.|:||||.||.|.||:.||||||:.|.|...|.:||..:.|||::.....:||:.||
 Frog    72 LSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPSVPIILVANKKDLRNDEHVRNELARMKQ 136

  Fly   135 KPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRK--------CKFL 191
            :|:..|.|..:|..:.|.:|:||||.|::|::.||:.|..|||:     ||..        ||.|
 Frog   137 EPVRTEDGRAMAVRINAFEYLECSAKTKEGVREVFETATRAALQ-----KKHGRSGECMSCCKLL 196

  Fly   192  191
             Frog   197  196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 91/171 (53%)
rhobNP_001001214.1 RhoA_like 5..179 CDD:206662 91/171 (53%)

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