DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rnd1a

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_073794324.1 Gene:rnd1a / 405780 ZFINID:ZDB-GENE-040630-6 Length:236 Species:Danio rerio


Alignment Length:194 Identity:76/194 - (39%)
Similarity:109/194 - (56%) Gaps:7/194 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69
            |.|:|||...|||.:|.....:.:|..||||||:||...:.:..:...|.|:||:|...||.:||
Zfish    15 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTAGLELEEQRVELSLWDTSGSPYYDNVRP 79

  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ 134
            |.|...|..|:||.:..|.:.|:..:||..||...|..|..:|||.:.|||.:..||.:|:..:.
Zfish    80 LCYSDADAVLLCFDISRPDTVESSLKKWKAEIMDFCPSTRIILVGCKTDLRTDVCTLMELSNQRL 144

  Fly   135 KPITMEQGEKLAKELKAVKYVECSALT-QKGLKNVFDEAILAA---LEPP---EPTKKRKCKFL 191
            .||:.|||..|||::.|..|:||||.| :|.:.:||..|.|..   |:||   .||::...:.|
Zfish   145 TPISHEQGTLLAKQVGAEVYLECSAFTSEKSIHSVFRSASLTCLNKLQPPIKQSPTRRLSKRLL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 70/175 (40%)
rnd1aXP_073794324.1 None

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