DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rhogd

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_956974.1 Gene:rhogd / 393653 ZFINID:ZDB-GENE-040426-1504 Length:191 Species:Danio rerio


Alignment Length:191 Identity:112/191 - (58%)
Similarity:143/191 - (74%) Gaps:0/191 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65
            ||||||||||||||||||||||||||.||.||:|||||||:..:.:.|...:|.|:||||||:||
Zfish     1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMSVDGRTVSLNLWDTAGQEEYD 65

  Fly    66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLA 130
            |||.||||||:||::|||:.||||..||:.||.||::|||...|.|||||:.|||.:..|::||.
Zfish    66 RLRTLSYPQTNVFIICFSIGSPSSLANVRHKWHPEVSHHCPNVPILLVGTKKDLRSDTETIKKLK 130

  Fly   131 KNKQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKCKFL 191
            :....|.|.:||..|.|::.||:|:|||||.|:|:::||.:|:.|.|.|......:||..|
Zfish   131 EQGLAPSTQQQGGTLCKQINAVRYLECSALRQEGVRDVFVDAVRAVLYPMTKKNTKKCVLL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 105/173 (61%)
rhogdNP_956974.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..191 CDD:476819 111/189 (59%)

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