DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rho3

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001018193.1 Gene:rho3 / 3361511 PomBaseID:SPAC23C4.08 Length:205 Species:Schizosaccharomyces pombe


Alignment Length:183 Identity:80/183 - (43%)
Similarity:107/183 - (58%) Gaps:9/183 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69
            |.|::||||.|||.||..:|...||..|.||:|:||...:.:.|....|.|:||||||:||:||.
pombe    15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRS 79

  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLR--DENSTLEKLAKN 132
            |||..|.|.::||:|.|..|.|||..||:||::.:|.....:||..:.|||  ||...      :
pombe    80 LSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADEEQV------D 138

  Fly   133 KQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL-EPPEPTK 184
            ..|.|..|:|...||::.||:|:||||...:|:...|.||...|| ..|..||
pombe   139 HSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQPRGTK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 75/173 (43%)
rho3NP_001018193.1 Rho3 14..205 CDD:206706 80/183 (44%)

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