DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rhogc

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_955986.1 Gene:rhogc / 324681 ZFINID:ZDB-GENE-030131-3402 Length:191 Species:Danio rerio


Alignment Length:191 Identity:116/191 - (60%)
Similarity:140/191 - (73%) Gaps:0/191 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65
            ||||||||||||||||||||||||||.||.||:|||||||:....:.|...:|.|:||||||:||
Zfish     1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPDEYIPTVFDNYSTQTCVDGRAVSLNLWDTAGQEEYD 65

  Fly    66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLA 130
            |||.||||||.||::||||.||||..||:.||.||:.|||...|.|||||:.|||.:..|||||.
Zfish    66 RLRTLSYPQTHVFIICFSVASPSSHANVRHKWHPEVCHHCPGVPVLLVGTKRDLRGDKETLEKLK 130

  Fly   131 KNKQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKCKFL 191
            :....|.|.:||..||:.:.||:|:|||||.|:|::.||:||:.|.|.|......:||..|
Zfish   131 EQGMSPTTPQQGSALARSIGAVRYLECSALLQEGVREVFNEAVRAVLYPNAKKHTKKCVLL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 109/173 (63%)
rhogcNP_955986.1 RhoG 1..191 CDD:133277 115/189 (61%)

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