DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and Rnd2

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001010953.1 Gene:Rnd2 / 303553 RGDID:1306172 Length:228 Species:Rattus norvegicus


Alignment Length:174 Identity:71/174 - (40%)
Similarity:109/174 - (62%) Gaps:1/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69
            |.|||||...|||.||..:..:.:|..||||||:||..:..|......|.::||:|...||.:||
  Rat     9 KIVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTSGSSYYDNVRP 73

  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ 134
            |:||.:|..|:||.:..|.:.::|.:||..|....|.....:|||.::|:|.:.:||.:|:|.:.
  Rat    74 LAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRTDLATLRELSKQRL 138

  Fly   135 KPITMEQGEKLAKELKAVKYVECSA-LTQKGLKNVFDEAILAAL 177
            .|:|.|||..|||::.||.|||||: .:::.:::||..|.:|:|
  Rat   139 IPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVATVASL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 70/172 (41%)
Rnd2NP_001010953.1 P-loop containing Nucleoside Triphosphate Hydrolases 7..228 CDD:476819 71/174 (41%)

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