DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and Rhoj

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001008321.1 Gene:Rhoj / 299145 RGDID:1310528 Length:211 Species:Rattus norvegicus


Alignment Length:185 Identity:119/185 - (64%)
Similarity:147/185 - (79%) Gaps:2/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            :||||||||||||||||:||..:.||.||||||||:|||||.:||:.:.|||:||||||||::||
  Rat    22 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLR 86

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            |||||.|||||:|||||:|:|:.||:|:||||:.......|::|:||||||||:..||.:|...|
  Rat    87 PLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMK 151

  Fly   134 QKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKC 188
            :||:|.|.|.||||.:.|..|:|||||||||||.|||||||....|.:  ||:.|
  Rat   152 EKPLTYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEAILTIFHPKK--KKKGC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 115/172 (67%)
RhojNP_001008321.1 P-loop containing Nucleoside Triphosphate Hydrolases 22..195 CDD:476819 115/172 (67%)

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